Jatropha Genome Database
- JcCB0033831.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0033831.20 - phase: 0
(2193 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c12206 724 0.0
KJC_c09493 628 e-179
KJC_s16475 270 1e-71
KJC_c07741 56 4e-07
>KJC_c12206
Length = 420
Score = 724 bits (365), Expect = 0.0
Identities = 411/421 (97%), Gaps = 4/421 (0%)
Strand = Plus / Minus
Query: 932 gcaagaatacaattgggagctacacatgcagttgcccacttggaatgcgcggtgat-ggt 990
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 420 gcaagaatacaattgggagctacacatgcagttgcc-acttggaatgcgcggtgattggt 362
Query: 991 aaagttggttgtcaaggatttcgcattacaactattgctgcaattgttggaggggttgca 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaagttggttgtcaaggatttcgcattacaactattgctgcaattgttggaggggttgca 302
Query: 1051 tccattacgattatcgccttactgatcatcattttatacaagaggcgaagaaatgagagg 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccattacgattatcgccttactgatcatcattttatacaagaggcgaagaaatgagagg 242
Query: 1111 aattttttgaaaaa-tggcggcttgttgtt-gaagcaccaaagggtaagaatcttcacag 1168
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 241 aattttttgaaaaaatggcggcttgttgtttgaagcaccaaagggtaagaatcttcacag 182
Query: 1169 aagcagaattagtgaaggctactaaaaattatgatcgaagtctacttcttggcgaaggag 1228
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 181 aagcagaattagtgaaggctaccaaaaattatgatccaagtctacttcttggcgaaggag 122
Query: 1229 gtttcggatatgtttataaaggagttttagcagataacacccaagttgcagtaaagaagc 1288
|||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 gttttggatatgtatacaaaggagttttggcagataacacccaagttgcagtaaagaagc 62
Query: 1289 ctaaagataaagacaagactcaaataaatcaagaatttcaacaagaacttggcattgttt 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctaaagataaagacaagactcaaataaatcaagaatttcaacaagaacttggcattgttt 2
Query: 1349 c 1349
|
Sbjct: 1 c 1
>KJC_c09493
Length = 397
Score = 628 bits (317), Expect = e-179
Identities = 379/399 (94%), Gaps = 2/399 (0%)
Strand = Plus / Plus
Query: 282 ggcatttaaatgctacaacaagaaagggttgacccttaagtttgatcaaaatattagact 341
||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||| ||
Sbjct: 1 ggcatttaaatgctacaacgagacagggttgacccttgagtttgatcaagatattagtct 60
Query: 342 gggaaatggcccgtttcggttctccgatactcgaaacaagctcacagctattgggtgtga 401
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 gggagatggcccgtttcggttctccgatactcgaaacaagctcacagttattgggtgtga 120
Query: 402 tactttagcccttatgagagacgctgcagagacttttggcagcggttgtgtttcgttgtg 461
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 tactttagcccttatgagagatgctgcagagacttttggcagcggttgtgtctcgttgtg 180
Query: 462 tgacgagaatgttactctacaaggttcttgctcaggttttggatgctgtcaaacatcggt 521
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgacaagaatgttactctacatggttcttgctcaggttttggatgctgtcaaacatcggt 240
Query: 522 gccacaaagtcttaaaacactgagaattaatcttgcaagtccgagtaatcatagcagcgt 581
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccacaaagtcttcaaacactgacaattaatcttgcaagtccgagtaatcatagcagcgt 300
Query: 582 ttggcggtttaatccgtgtgaattcgcatttctagctgatgaaaggactttcgatgtttc 641
||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 ttggcagtttaanccgtgtgaattcgcatttctagctgatgaaag--ctttcgatgtttc 358
Query: 642 aaagctgcaactctctgctcttccacgttcgccagtcac 680
||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 359 aaagctgcagctctctgctcttccaagttcgccggtcac 397
>KJC_s16475
Length = 373
Score = 270 bits (136), Expect = 1e-71
Identities = 148/152 (97%)
Strand = Plus / Plus
Query: 882 agacattgatgagtgcaaagaaccagacaagtacaaatgccatggaagttgcaagaatac 941
||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||
Sbjct: 79 agacattgatgagtgcaaagaactaggcaagtacaaatgcgatggaagttgcaagaatac 138
Query: 942 aattgggagctacacatgcagttgcccacttggaatgcgcggtgatggtaaagttggttg 1001
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 aattgggagctacaaatgcagttgcccacttggaatgcgcggtgatggtaaagttggttg 198
Query: 1002 tcaaggatttcgcattacaactattgctgcaa 1033
||||||||||||||||||||||||||||||||
Sbjct: 199 tcaaggatttcgcattacaactattgctgcaa 230
>KJC_c07741
Length = 461
Score = 56.0 bits (28), Expect = 4e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1736 taactgaaaagagcgatgtctatagctttggagtggttct 1775
||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 110 taactgaaaagagtgatgtctatagttttggagttgttct 149