Jatropha Genome Database

JcCB0033761.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0033761.20 + phase: 0 /TE/partial
         (199 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07048                                                            127   1e-29
KJC_s20070                                                             82   6e-16

>KJC_c07048 
          Length = 450

 Score =  127 bits (64), Expect = 1e-29
 Identities = 79/84 (94%)
 Strand = Plus / Plus

                                                                       
Query: 6   tctcacttatgaagaagaaccagttcagatcttagccaaagaaactaaggaattgcggaa 65
           |||||| |||||||||||||||||||| ||| |||||||||||||||| |||||||||||
Sbjct: 366 tctcacgtatgaagaagaaccagttcaaatcctagccaaagaaactaaagaattgcggaa 425

                                   
Query: 66  caagaaaatagcattggttaaagt 89
           |||||||||||||||||| |||||
Sbjct: 426 caagaaaatagcattggtgaaagt 449


>KJC_s20070 
          Length = 353

 Score = 81.8 bits (41), Expect = 6e-16
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 6   tctcacttatgaagaagaaccagttcagatcttagccaaagaaactaag 54
           ||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 280 tctcacttatgaagaagaaccagttcaaatcctagccaaagaaactaag 328