Jatropha Genome Database

JcCB0029801.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0029801.10 + phase: 2 /partial
         (379 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04313                                                            751   0.0  

>KJC_c04313 
          Length = 670

 Score =  751 bits (379), Expect = 0.0
 Identities = 379/379 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggcttgacacagtcaaactacaaggaattgaacgtcttgtatgagaagtataaaagcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tggcttgacacagtcaaactacaaggaattgaacgtcttgtatgagaagtataaaagcca 228

                                                                       
Query: 61  aggctttgagatcttggcatttccctgcaaccagtttgccggacaagaaccgggagacag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aggctttgagatcttggcatttccctgcaaccagtttgccggacaagaaccgggagacag 288

                                                                       
Query: 121 tgataagattcaagaaactgcttgcacattgttcaaagctgaattcccaatttttgataa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tgataagattcaagaaactgcttgcacattgttcaaagctgaattcccaatttttgataa 348

                                                                       
Query: 181 gattgaggtgaatgggaaaaactctgcacccctctacaagtacctaaaatctgaaaaggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gattgaggtgaatgggaaaaactctgcacccctctacaagtacctaaaatctgaaaaggg 408

                                                                       
Query: 241 tgggatttttggagatgccataaagtggaatttcaccaaatttttagtgaacaaggaggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tgggatttttggagatgccataaagtggaatttcaccaaatttttagtgaacaaggaggg 468

                                                                       
Query: 301 gaagaccgtggagcgatatgctcctactacatctccccttaaaattgagaaggacataca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gaagaccgtggagcgatatgctcctactacatctccccttaaaattgagaaggacataca 528

                              
Query: 361 gaatctgttgggatcttct 379
           |||||||||||||||||||
Sbjct: 529 gaatctgttgggatcttct 547