Jatropha Genome Database
- JcCB0028471.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0028471.10 - phase: 0
(978 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04107 1679 0.0
KJC_c04629 254 4e-67
KJC_c12861 125 2e-28
>KJC_c04107
Length = 1005
Score = 1679 bits (847), Expect = 0.0
Identities = 857/859 (99%), Gaps = 1/859 (0%)
Strand = Plus / Minus
Query: 1 atggctatggagaagggtgcgattgccaaagatgttactgaactcattggtaaaacgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 atggctatggagaagggtgcgattgccaaagatgttactgaactcattggtaaaacgcca 799
Query: 61 ttagtgtatctgaaccatgttgtggatggctgtgttgctcgtatcgctgccaagctggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ttagtgtatctgaaccatgttgtggatggctgtgttgctcgtatcgctgccaagctggag 739
Query: 121 atgatggaaccttgctcaagtgttaaagataggattggatacagtatgattgcagatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 atgatggaaccttgctcaagtgttaaagataggattggatacagtatgattgcagatgct 679
Query: 181 gaggagaaaggcctcatcaagccgggtgagagtgtcctcatcgagcccacaagtggcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gaggagaaaggcctcatcaagccgggtgagagtgtcctcatcgagcccacaagtggcaat 619
Query: 241 actggtatagggctggcattcatggcagctgctaagggctacaagctcataattacgatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 actggtatagggctggcattcatggcagctgctaagggctacaagctcataattacgatg 559
Query: 301 cctgcttcaatgagtctagaaagaagaatggttctccgtgcttttggagctgagctggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cctgcttcaatgagtctagaaagaagaatggttctccgtgcttttggagctgagctggtt 499
Query: 361 ctgactgatccagccaggggcatgaaaggagctgttcagaaggcagaagagatattagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ctgactgatccagccaggggcatgaaaggagctgttcagaaggcagaagagatattagca 439
Query: 421 aagacaccaaatgcttatatcctacagcaatttgagaatcctgccaacccaaagattcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aagacaccaaatgcttatatcctacagcaatttgagaatcctgccaacccaaagattcac 379
Query: 481 tatgagaccaccggaccagagatctggaaaggctcaggtgggaaagttgatgctcttgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tatgagaccaccggaccagagatctggaaaggctcaggtgggaaagttgatgctcttgtt 319
Query: 541 tccgggattgggactgggggtacagttacaggtgcagggagatatctcaaggagcaaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tccgggattgggactgggggtacagttacaggtgcagggagatatctcaaggagcaaaac 259
Query: 601 cctgatataaagatctatggtatagaaccagttgaaagtgctgtgttgtctggagggaaa 660
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 258 cctgatataaagacctatggtatagaaccagttgaaagtgctgtgttgtctggaggg-aa 200
Query: 661 ccaggcccacataagatccaaggaattggtgctggctttattcctggagttttggacgtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ccaggcccacataagatccaaggaattggtgctggctttattcctggagttttggacgtc 140
Query: 721 agtctacttgatgaagttgttcaagtatcgagtgaagaagcaattgaaactgctaaactt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 agtctacttgatgaagttgttcaagtatcgagtgaagaagcaattgaaactgctaaactt 80
Query: 781 cttgccttgaaagaaggtttgctggtagggatatcttctggtgctgctgcagccgccgca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 cttgccttgaaagaaggtttgctggtagggatatcttctggtgctgctgcagccgccgca 20
Query: 841 attaggattgcaaagaggc 859
|||||||||||||||||||
Sbjct: 19 attaggattgcaaagaggc 1
>KJC_c04629
Length = 511
Score = 254 bits (128), Expect = 4e-67
Identities = 373/452 (82%), Gaps = 2/452 (0%)
Strand = Plus / Plus
Query: 481 tatgagaccaccggaccagagatctggaaaggctcaggtgggaaagttgatgctcttgtt 540
|||||||| || |||||||| || |||||||| ||||| || |||||||||||| |||||
Sbjct: 8 tatgagactactggaccagaaatatggaaaggatcaggaggaaaagttgatgct-ttgtt 66
Query: 541 tccgggattgggactgggggtacagttacaggtgcagggagatatctcaaggagcaaaac 600
|| |||||||| |||||||| || | |||||||| |||| ||| || || ||||| ||
Sbjct: 67 tcagggattggtactgggggaaccataacaggtgctgggaaatacctaaaagagcagaat 126
Query: 601 cctgatataaagatctatggtatagaaccagttgaaagtgctgtgttgtctggagggaaa 660
||| | || ||| | |||||| | |||||||||||||| ||||| || |||||||| |||
Sbjct: 127 cctaacattaagttgtatggtgtggaaccagttgaaagcgctgttttatctggaggaaaa 186
Query: 661 ccaggcccacataagatccaaggaattggtgctggctttattcctggagttttggacgtc 720
|| || || ||||||||||||||||| ||||||||||| || || |||||| |||| ||
Sbjct: 187 cctggtccgcataagatccaaggaataggtgctggcttcatcccaggagttctggaagtt 246
Query: 721 agtctacttgatgaagttgttcaagtatcgagtgaagaagcaattgaaactgctaaactt 780
| | |||||||||||||||||||||| ||||| ||||||||||||||||| || |||
Sbjct: 247 gatatcattgatgaagttgttcaagtatcaagtgatgaagcaattgaaactgcaaagctt 306
Query: 781 cttgccttgaaagaaggtttgctggtagggatatcttctggtgctgctgcagccgccgca 840
||||| | |||| ||||||||| || || ||||||||||||||||| | || || |||
Sbjct: 307 cttgcactaaaag-aggtttgcttgtgggaatatcttctggtgctgccactgctgctgca 365
Query: 841 attaggattgcaaagaggcccgaaaatgctggaaaactcattgttgtggtcttccccagc 900
||| | ||||||||||||| || |||||||||||||| ||||||||| | || || |||
Sbjct: 366 gttaagcttgcaaagaggccagagaatgctggaaaacttattgttgtgatttttccaagc 425
Query: 901 ttcggagagcgctatttatcctccgtgctttt 932
|| |||||| | || | ||||||||||||||
Sbjct: 426 tttggagagaggtacctgtcctccgtgctttt 457
>KJC_c12861
Length = 655
Score = 125 bits (63), Expect = 2e-28
Identities = 260/323 (80%), Gaps = 2/323 (0%)
Strand = Plus / Plus
Query: 28 aaagatgttactgaactcattggtaaaacgccattagtgtatctgaaccatgttgtggat 87
|||||||| |||||||| ||||| ||||| || || || ||||| |||||||||||||||
Sbjct: 107 aaagatgtaactgaactaattggcaaaactcctttggtatatctcaaccatgttgtggat 166
Query: 88 ggctgtgttgctcgtatcgctgccaagctggagatgatggaaccttgctcaagtgttaaa 147
|| || ||||||||||| ||||| || ||||| |||||||| || ||||| || || |||
Sbjct: 167 ggttgcgttgctcgtattgctgctaaactggaaatgatggagccatgctctagcgtcaaa 226
Query: 148 gataggattggatacagtatgattgcagatgctgaggagaaaggcctcatcaagccgggt 207
| |||||| | ||||| ||||| ||||||| |||| |||||||| ||| || ||
Sbjct: 227 g-caggatt-gttacagcatgatctcagatgcggaggccaaaggcctactcactccagga 284
Query: 208 gagagtgtcctcatcgagcccacaagtggcaatactggtatagggctggcattcatggca 267
||||||| | || ||| |||| ||||| |||||||| ||||| | ||||||||||||
Sbjct: 285 cagagtgttttgattgaggccactagtggaaatactgggataggattagcattcatggca 344
Query: 268 gctgctaagggctacaagctcataattacgatgcctgcttcaatgagtctagaaagaaga 327
||||| || || || | ||| || || ||||||||||| || |||||||| || || ||
Sbjct: 345 gctgccaaaggatataggcttattatcacgatgcctgcatctatgagtcttgagaggagg 404
Query: 328 atggttctccgtgcttttggagc 350
|| |||||||||||||||||||
Sbjct: 405 attattctccgtgcttttggagc 427
Score = 115 bits (58), Expect = 2e-25
Identities = 185/226 (81%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 547 attgggactgggggtacagttacaggtgcagggagatatctcaaggagcaaaaccctgat 606
||||| |||||||| || | |||||||| |||| ||| || || ||||| || ||| |
Sbjct: 431 attggtactgggggaaccataacaggtgctgggaaatacctaaaagagcagaatcctaac 490
Query: 607 ataaagatctatggtatagaaccagttgaaagtgctgtgttgtctggagggaaaccaggc 666
|| ||| | |||||| | |||||||||||||| ||||| || |||||||| ||||| ||
Sbjct: 491 attaagttgtatggtgtggaaccagttgaaagcgctgttttatctggaggaaaacctggt 550
Query: 667 ccacataagatccaaggaattggtgctggctttattcctggagttttggacgtcagtcta 726
|| ||||||||||||||||| ||||||||||| || || |||||| |||| || | |
Sbjct: 551 ccgcataagatccaaggaataggtgctggcttcatcccaggagttctggaagttgatatc 610
Query: 727 cttgatgaagttgttcaagtatcgagtgaagaagcaattgaaactg 772
|||||||||||| ||||||||| ||||| ||||||||||||||||
Sbjct: 611 attgatgaagttg-tcaagtatcaagtgatgaagcaattgaaactg 655