Jatropha Genome Database
- JcCB0028271.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0028271.30 + phase: 0 /partial
(2016 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08252 1100 0.0
KJC_c10793 90 2e-17
>KJC_c08252
Length = 586
Score = 1100 bits (555), Expect = 0.0
Identities = 576/579 (99%), Gaps = 3/579 (0%)
Strand = Plus / Minus
Query: 374 ctgccccacagatgggcaca-gtggccccaacagcatctcaaaatcctggcttcagaggc 432
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ctgccccacagatgggcacacgtggccccaacagcatctcaaaatcctggcttcagaggc 520
Query: 433 ccaggagttccaaatcctggtatgaaccagcattactttcctcctcaacaaagtccatca 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ccaggagttccaaatcctggtatgaaccagcattactttcctcctcaacaaagtccatca 460
Query: 493 attagaccacctcaggcgatccaacctggagcttcttcccatccccctcagggcttcatt 552
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 459 attagaccacctcaggcgatccaacctggagcttcttcccatcccc-tcagggcttcatt 401
Query: 553 agtccagaattctctagaggaggtggtatggttggtaattctcaggctatgcctacaggt 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 agtccagaattctctagaggaggtggtatggttggtaattctcaggctatgcctacaggt 341
Query: 613 actgctccacgtccctctcaggctatgcctacaagtactgctccacgtccctctcagctc 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 actgctccacgtccctctcaggctatgcctacaagtactgctccacgtccctctcagctc 281
Query: 673 atgcctagttctgctcctggcactagcatcccaacctcaaacatctcaaccagttggctt 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atgcctagttctgctcctggcactagcatcccaacctcaaacatctcaaccagttggctt 221
Query: 733 ggaggaaaaactagtgcagctatgacaggccctccttctacacccagtgctactatgcag 792
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 220 ggaggaaaaactagtgcagctatgacagg-cctccttctacacccagtgctactatgcag 162
Query: 793 ccacgagctcaagtttctatgccatctcagccaactgcgaatgattctaaagccttagtt 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ccacgagctcaagtttctatgccatctcagccaactgcgaatgattctaaagccttagtt 102
Query: 853 gcttctgggaatgggttttccactcactcgtcttttggaagtgacgggttttctgcaatc 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gcttctgggaatgggttttccactcactcgtcttttggaagtgacgggttttctgcaatc 42
Query: 913 tcttcaaccagaaaacaggacctttccatccctacttat 951
|||||||||||||||||||||||||||||||||||||||
Sbjct: 41 tcttcaaccagaaaacaggacctttccatccctacttat 3
>KJC_c10793
Length = 491
Score = 89.7 bits (45), Expect = 2e-17
Identities = 129/157 (82%)
Strand = Plus / Minus
Query: 1267 agagatggaaggatcaccggtgagcaggcacggaatctattcttgagttgggggcttcca 1326
|||||||||| ||| || ||||| |||||||| ||||| ||||| |||||| |||| |||
Sbjct: 167 agagatggaaagattacaggtgaacaggcacgcaatctcttcttaagttggcggctgcca 108
Query: 1327 cgtgaggttttgaagcaggtatgggacttatctgatcaggatagtgatagcatgctttct 1386
| ||||| || | ||||| |||||||| |||||||| || | |||||| |||||||||
Sbjct: 107 agagaggtcttaatacaggtttgggacttgtctgatcaagacaatgatagtatgctttct 48
Query: 1387 ttgagggaattctgctttgctctttatttgatggagc 1423
||||| || ||||| |||| | |||||||||||||
Sbjct: 47 ttgagagagttctgtactgctgtctatttgatggagc 11