Jatropha Genome Database
- JcCB0028241.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0028241.10 + phase: 0
(753 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04399 1392 0.0
>KJC_c04399
Length = 834
Score = 1392 bits (702), Expect = 0.0
Identities = 746/753 (99%), Gaps = 6/753 (0%)
Strand = Plus / Minus
Query: 1 atggcttgtacaacctcacctctgaaaaccgccgcttactttgcaagactatcaaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atggcttgtacaacctcacctctgaaaaccgccgcttactttgcaagactatcaaacaaa 742
Query: 61 acttcacctaccatcaccaaatcattacgcttgccttccatgcctgcgaacccatctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acttcacctaccatcaccaaatcattacgcttgccttccatgcctgcgaacccatctctc 682
Query: 121 tctttttcgtcaaaaacttccatttttaacaacagaatcaataataccttctctgtacct 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctttt-cgtcaaaaacttccatttttaacaacagaatcaataataccttctctgtacct 623
Query: 181 aagagatctttctcctgcaaaagccaagcatctgatgattccacacccagtaagtttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aagagatctttctcctgcaaaagccaagcatctgatgattccacacccagtaagtttcaa 563
Query: 241 gaactgcatgtttatgagatcaatgagagagatcggggaagtcccgcctatcttcgattg 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 562 gaactgcatgtttatgagatcaatgagagagatcggg-aagtcccgcctatcttcgattg 504
Query: 301 agccagaaagaagttaattctcttggagatcttgtgccttttagcaacaaactttacacc 360
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agccagaaaga-gttaat-ctcttggagatcttgtgccttttagcaacaaactttacacc 446
Query: 361 ggggacctgcaaaagcggataggaataacagcaggaatatgcattttgatcgaacacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggggacctgcaaaagcggataggaataacagcaggaatatgcattttgatcgaacacaaa 386
Query: 421 gcggaaaagaaaggtgaccggtatgaagcaatatacagcttttatttcggggattatggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcggaaaagaaaggtgaccggtatgaagcaatatacagcttttatttcggggattatggt 326
Query: 481 catatagcggtgcaaggggcatatttgacttatgaggactcgtatcttgctgtgactggt 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catatagcggtgcaaggg-catatttgacttatgaggactcgtatcttgctgtgactggt 267
Query: 541 gggacgggaatattcgaaggggtgtcgggtcaagttaagctccggcagcttattttccct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gggacgggaatattcgaaggggtgtcgggtcaagttaagctccggcagcttattttccct 207
Query: 601 ttcaagctattttataccttttatttaaaggggattaaggatttgcccgaggaattggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ttcaagctattttataccttttatttaaaggggattaaggatttgcccgaggaattggtt 147
Query: 661 gggaagccggttgaaccacacccagctgttgagccccaccctgatgctaaggcttgccaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gggaagccggttgaaccacacccagctgttgagccccaccctgatgctaaggcttgccaa 87
Query: 721 ccacatgctgctcttgttaattttactgattaa 753
|||||||||||||||| ||||||||| ||||||
Sbjct: 86 ccacatgctgctcttg-taattttacngattaa 55