Jatropha Genome Database
- JcCB0027861.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0027861.10 - phase: 0 /pseudo/partial
(1197 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02048 1338 0.0
KJC_c01365 490 e-138
>KJC_c02048
Length = 855
Score = 1338 bits (675), Expect = 0.0
Identities = 710/725 (97%), Gaps = 15/725 (2%)
Strand = Plus / Plus
Query: 341 cagtactttttaaaggtattgcacattctataaatgcagccaatggcttggccttgaaag 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagtactttttaaaggtattgcacattctataaatgcagccaatggcttggccttgaaag 60
Query: 401 tcctttcagcttctccttcggcatattcagcaaatcctagttccaagctatcaagtcccc 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctttcagcttctccttcggcatattcagcaaatcctagttccaagctatcaagtcccc 120
Query: 461 catcacttactggatctgccatctcattggtttcagtagttcaggctagaaacaatgctc 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catcacttactggatctgccatctcattggtttcagtagttcaggctagaaacaatgctc 180
Query: 521 ggattctgatcactggttccttagatatgtttagtaaccggtttttcaaatcaggtgtgc 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggattctgatcactggttccttagatatgtttagtaaccggtttttcaaatcaggtgtgc 240
Query: 581 agaaggctgagagcacaacaaaatatgagaaatcaggtaatgagcagtttgtgactgaac 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaaggctgagagcacaacaaaatatgagaaatcaggtaatgagcagtttgtgactgaac 300
Query: 641 ttagcaaatggattttccatgaaagaggtcatctaaaggctgttaatcttggacaccaca 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttagcaaatggattttccatgaaagaggtcatctaaaggctgttaatcttggacaccaca 360
Query: 701 aagttggagaaactgatgaacctgcaatatataggatcaaagatgatct----------- 749
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagttggagaaactgatgaacctgcaatatataggatcaaagatgatctggaattttatg 420
Query: 750 ----ggtatacgaatggtctgggaagagctgggaaccatatgttgccaatgatgttcagg 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgaggtatacgaatggtctgggaagagctgggaaccatatgttgccaatgatgttcagg 480
Query: 806 ttcagttctacatgatgagcccttatgttttaaaaaccctctcaacagatcagaagggtc 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttcagttctacatgatgagcccttatgttttaaaaaccctctcaacagatcagaagggtc 540
Query: 866 tgtatcatacatcattcaaggtgcctgatgtttatggggttttccaattcaaggttgagt 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtatcatacatcattcaaggtgcctgatgtttatggggttttccaattcaaggttgagt 600
Query: 926 atcagaggcttggatatacaagcttgtctctttccaaacagattccagttcggcccttca 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcagaggcttggatatacaagcttgtctctttccaaacagattccagttcggcccttca 660
Query: 986 gacacaacgaatatgagagatttataacaactgcctatccctattatggtgcttcttttg 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gacacaacgaatatgagagatttataacaactgcctatccctattatggtgcttcttttg 720
Query: 1046 ccacg 1050
|||||
Sbjct: 721 ccacg 725
Score = 91.7 bits (46), Expect = 4e-18
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 1152 gatggccggcttctttatcttcagttttgtctacctttacaacaag 1197
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gatggccggcttctttatcttcagttttgtctacctttacaacaag 770
>KJC_c01365
Length = 573
Score = 490 bits (247), Expect = e-138
Identities = 261/263 (99%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 74 gatttggaggtgcattggatttagccgctgtgcttgacttcgttgactcaggccatgact 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gatttggaggtgcattggatttagccgctgtgcttgacttcgttgactcaggccatgact 372
Query: 134 tgattatagccgctgatgcttctgcttctgatttcattaagagcatcgcaaccgaatgtg 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tgattatagccgctgatgcttctgcttctgatttcattaagagcatcgcaaccgaatgtg 432
Query: 194 gggtcgattttgatgaggatccttccgcaatggtcattgatcataaaagctatgcagtct 253
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gggtcga-tttgatgaggatccttccgcaatggtcattgatcataaaagctatgcagtct 491
Query: 254 cgaagactgagggtgatcatacgttgattgctgcagacagtttcattgaatctgatgtta 313
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cgaagactga-ggtgatcatacgttgattgctgcagacagtttcattgaatctgatgtta 550
Query: 314 tactgggaaaaactaaaattgag 336
|||||||||||||||||||||||
Sbjct: 551 tactgggaaaaactaaaattgag 573