Jatropha Genome Database
- JcCB0027041.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0027041.10 - phase: 0
(1182 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c12852 1076 0.0
>KJC_c12852
Length = 568
Score = 1076 bits (543), Expect = 0.0
Identities = 564/567 (99%), Gaps = 3/567 (0%)
Strand = Plus / Minus
Query: 133 gtagtagcg-ctggtgaaatcagtgggcgcc-acaaaggtgaagctgtacgacgcagatc 190
||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 566 gtagtagcggctggtgaaatca-tgggcgccgacaaaggtgaagctgtacgacgcagatc 508
Query: 191 cacgggtgcttcgtgcatttgccaacaccggagtggaattcatagtaggacttggaaacg 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cacgggtgcttcgtgcatttgccaacaccggagtggaattcatagtaggacttggaaacg 448
Query: 251 agtatctatcgaagatgagagatccagataaagctcaagcttgggtgaaatcaaacgttc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agtatctatcgaagatgagagatccagataaagctcaagcttgggtgaaatcaaacgttc 388
Query: 311 agtgctacttacctgccaccaaaatcacttgcattactgtcggcaacgagatcttaacct 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agtgctacttacctgccaccaaaatcacttgcattactgtcggcaacgagatcttaacct 328
Query: 371 tcaacgacacctctctcaccgaccaccttcttcccgcaatgcaaagtgtacacactgcgc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tcaacgacacctctctcaccgaccaccttcttcccgcaatgcaaagtgtacacactgcgc 268
Query: 431 ttgtcaatctaggattagacaagcaagtcaccgtcaccaccgctcactctctagccattc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttgtcaatctaggattagacaagcaagtcaccgtcaccaccgctcactctctagccattc 208
Query: 491 tcgaaacctcttatcctccgtccgcaggagctttccggcgagatctggttggatgcgtta 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tcgaaacctcttatcctccgtccgcaggagctttccggcgagatctggttggatgcgtta 148
Query: 551 ctccaatcttaaattttcatgccaaaactggctcacctttcttgattaacgcttatccat 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ctccaatcttaaattttcatgccaaaactggctcacctttcttgattaacgcttatccat 88
Query: 611 acttcgcctacaagggcaatccaaagcaagtcaatttagatttcgttctcttccagccca 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 acttcgcctacaagggcaatccaaagcaagtcaatttagatttcgttctcttccagccca 28
Query: 671 atcagggtattgtagatcctgtttcca 697
|||||||||||||||||||||||||||
Sbjct: 27 atcagggtattgtagatcctgtttcca 1