Jatropha Genome Database
- JcCB0026731.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0026731.10 + phase: 0 /partial
(1095 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02434 1558 0.0
KJC_c06912 351 2e-96
>KJC_c02434
Length = 1108
Score = 1558 bits (786), Expect = 0.0
Identities = 849/858 (98%), Gaps = 9/858 (1%)
Strand = Plus / Minus
Query: 1 ttacttagcacaaaacgagtacagtcgttccgacccgtgagagaagaagaagttgcatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 ttacttagcacaaaacgagtacagtcgttccgacccgtgagagaagaagaagttgcatct 792
Query: 61 tttgtaaaa-cttatgcgtacaaagaaaggaactcctgttaatcttactcatgctttatt 119
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tttgtaaaaacttatgcgtacaaagaaaggaactcctgttaatcttactcatgctttatt 732
Query: 120 tgctttaacaaattctatagttgcaagaaatgctgttggtcataaaagcaaaaaccaaga 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 -gctttaacaaattctatagttgcaagaaatgctgttggtcataaaagcaaaaaccaaga 673
Query: 180 ggcgtt-gttagaagttattgatgacatagttgtatcaggaggaggtgttagtatagttg 238
| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 672 g-cgttagttagaagttattgatgacatagttgtatcaggag-aggtgttagtatagttg 615
Query: 239 atatctttccttccctacaatggcttcctactgccaagagggaaagatcaagaatttgga 298
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 atatctttcct-ccctacaatggcttcctactgccaagagggaaagatcaagaatttgga 556
Query: 299 aattgcaccaaaatacagatgagattctcgaagatatcttacaagagcatagagctaaaa 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aattgcaccaaaatacagatgagattctcgaagatatcttacaagagcatagagctaaa- 497
Query: 359 gacaggcgacagcttccaagaattgggataggagcgaagctgataatcttcttgatgttc 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 496 gacaggcgacagcttccaagaattgggataggagcgaagctgataatcttcttgatgt-c 438
Query: 419 ttttggatcttcaacagagcggaaatcttgatgttcctttaactgatgtcgccatcaaag 478
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 437 ttttggatcttcaacagagcggaaatcttgatgt-cctttaactgatgtcgccatcaaag 379
Query: 479 cagcaattattgatatgtttggtgctggaagcgacacatcctcaaaaactgcagaatggg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cagcaattattgatatgtttggtgctggaagcgacacatcctcaaaaactgcagaatggg 319
Query: 539 caatggctgagttgatgaggaatccagaagtaatgaagaaagcacaagaagaattgcgga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 caatggctgagttgatgaggaatccagaagtaatgaagaaagcacaagaagaattgcgga 259
Query: 599 atttctttggtgaaaatggaaaggttgaggaagcaaaacttcacgaattaaaatggataa 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 atttctttggtgaaaatggaaaggttgaggaagcaaaacttcacgaattaaaatggataa 199
Query: 659 agttaattattaaagaaacattgagattacatcctgcagtggctgtaattccaagggttt 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 agttaattattaaagaaacattgagattacatcctgcagtggctgtaattccaagggttt 139
Query: 719 gtagggaaaagactaaagtttatggatatgacgttgagcctggcactcgggttttcatta 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gtagggaaaagactaaagtttatggatatgacgttgagcctggcactcgggttttcatta 79
Query: 779 acgtgtggtcaatcggaagagatcctaaagtttggagtgaagctgagagattcaagccgg 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 acgtgtggtcaatcggaagagatcctaaagtttggagtgaagctgagagattcaagccgg 19
Query: 839 agagatttattgatagcg 856
||||||||||||||||||
Sbjct: 18 agagatttattgatagcg 1
>KJC_c06912
Length = 550
Score = 351 bits (177), Expect = 2e-96
Identities = 393/465 (84%)
Strand = Plus / Plus
Query: 623 ttgaggaagcaaaacttcacgaattaaaatggataaagttaattattaaagaaacattga 682
||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| |||
Sbjct: 13 ttgaggaagcaaaacttcaggaattaaaatggttgaagttaattattaaagaaacaatga 72
Query: 683 gattacatcctgcagtggctgtaattccaagggtttgtagggaaaagactaaagtttatg 742
|| ||||||||| | | | ||| |||||||||||||||||||||||||||||||| ||
Sbjct: 73 gactacatcctgtactttcagtacttccaagggtttgtagggaaaagactaaagttagtg 132
Query: 743 gatatgacgttgagcctggcactcgggttttcattaacgtgtggtcaatcggaagagatc 802
|||| || ||| | |||| ||||| ||| | | || || ||| || | ||||||||||
Sbjct: 133 gatacgatgtttatcctgatactcgagttctggtcaatgtatgggcacttggaagagatc 192
Query: 803 ctaaagtttggagtgaagctgagagattcaagccggagagatttattgatagcgcaattg 862
||| ||||||||||||| |||||| |||||| |||||||||||||||||||| |||| |
Sbjct: 193 ctacagtttggagtgaacctgagaaattcaatccggagagatttattgatagttcaatcg 252
Query: 863 attacaggggtcttaattttgaactgattccatttggagcaggaaaaagaatatgccctg 922
|||| |||| | |||||||| |||||||||| |||||||||||| |||||||||
Sbjct: 253 attatttgggtaatcattttgaatatcttccatttggtgcaggaaaaagagtatgccctg 312
Query: 923 gaatgaccttaggaatggctaatctggagattttccttgcaaacttgctatatcattttg 982
|||| | ||||| |||| | || |||| | |||||||||||| ||||| | ||||||||
Sbjct: 313 gaattgcgttaggtatggttcatatggaaaatttccttgcaaatttgctctttcattttg 372
Query: 983 actggaaatttcctaaaggagtaactgcagaaaatcttgacatgaatgaagcttttggag 1042
|||||||||||||||||||| |||||||||| ||||||||||||| || ||||||||||
Sbjct: 373 actggaaatttcctaaaggaataactgcagagaatcttgacatgaccgatgcttttggag 432
Query: 1043 gagctgtcaaaagaaaagtagaccttgaattgatccccattccat 1087
||| | | || |||||||| ||||||||| |||| ||||||||||
Sbjct: 433 gagttatgaagagaaaagttgaccttgaactgattcccattccat 477