Jatropha Genome Database
- JcCB0025591.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0025591.20 - phase: 0 /partial
(1645 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00643 2034 0.0
KJC_c00873 908 0.0
KJC_s17424 224 5e-58
KJC_c02600 198 3e-50
KJC_c03298 64 1e-09
>KJC_c00643
Length = 1334
Score = 2034 bits (1026), Expect = 0.0
Identities = 1026/1026 (100%)
Strand = Plus / Minus
Query: 1 atgattagctggaatgatctctacaccgttttaacggcggtggttcctctctatgttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 atgattagctggaatgatctctacaccgttttaacggcggtggttcctctctatgttgct 1105
Query: 61 atgattttggcctacggctctgtgcgctggtggaagattttcagtcccgaccagtgctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 atgattttggcctacggctctgtgcgctggtggaagattttcagtcccgaccagtgctct 1045
Query: 121 ggtatcaatcggttcgtggcgatatttgctgttccgcttttgtctttccattttatatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 ggtatcaatcggttcgtggcgatatttgctgttccgcttttgtctttccattttatatct 985
Query: 181 actaatgatccttacgccatgaatttccggtttatcgccgccgatacgcttcagaagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 actaatgatccttacgccatgaatttccggtttatcgccgccgatacgcttcagaagatt 925
Query: 241 ataatgttggtcgcgcttggtatttggactaatttcactaaaaatggaagcttagagtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ataatgttggtcgcgcttggtatttggactaatttcactaaaaatggaagcttagagtgg 865
Query: 301 atgattacaattttctcgttatccactcttccaaacacgcttgttatgggcattcctctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 atgattacaattttctcgttatccactcttccaaacacgcttgttatgggcattcctctg 805
Query: 361 ttaatcgctatgtacggcgagtattccggtagtctaatggttcaggtggtggttttgcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttaatcgctatgtacggcgagtattccggtagtctaatggttcaggtggtggttttgcag 745
Query: 421 tgtatcatttggtacacgcttctcttatttcttttcgagtacagaggagctaagatgttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgtatcatttggtacacgcttctcttatttcttttcgagtacagaggagctaagatgttg 685
Query: 481 attatggaacaattccctgaaactgctgcttccattgtgtcctttaaggtcgattcggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 attatggaacaattccctgaaactgctgcttccattgtgtcctttaaggtcgattcggat 625
Query: 541 gtcgtttcgttagatggccaagatttcttagaaactgatgcagaaatcggtgatgatggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtcgtttcgttagatggccaagatttcttagaaactgatgcagaaatcggtgatgatggg 565
Query: 601 aaattacatgtgacagtcagaaaatcgaatgcttcgcggcgatctttggggcccggttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaattacatgtgacagtcagaaaatcgaatgcttcgcggcgatctttggggcccggttca 505
Query: 661 ttctctgcattgactccacggccgtctaatctaaccggagctgagatttatagcttgagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttctctgcattgactccacggccgtctaatctaaccggagctgagatttatagcttgagt 445
Query: 721 tcgtcaagaaatccaactccaagaggttctaattttaacacttctgatttctataatatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcgtcaagaaatccaactccaagaggttctaattttaacacttctgatttctataatatg 385
Query: 781 atgggagtgcaggggtttccaggcggaaggctctcaaatttcggtccggcggatttatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atgggagtgcaggggtttccaggcggaaggctctcaaatttcggtccggcggatttatat 325
Query: 841 tccgttcaatcttcaagaggtccaacacctcgtccttcgaactttgaagaaaattgtgct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tccgttcaatcttcaagaggtccaacacctcgtccttcgaactttgaagaaaattgtgct 265
Query: 901 ccaatggctaccatatcttctccgagattcgggttttacccggcccagactgtaccaaca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccaatggctaccatatcttctccgagattcgggttttacccggcccagactgtaccaaca 205
Query: 961 tcctacccggctccgaatccggaattttcttctactgtttctacaaaaaacaccaagaat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tcctacccggctccgaatccggaattttcttctactgtttctacaaaaaacaccaagaat 145
Query: 1021 caggcc 1026
||||||
Sbjct: 144 caggcc 139
Score = 182 bits (92), Expect = 2e-45
Identities = 92/92 (100%)
Strand = Plus / Minus
Query: 1074 aaatactaaagcaaaccatgatgctaaagaactacacatgtttgtttggagctcaagtgc 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 aaatactaaagcaaaccatgatgctaaagaactacacatgtttgtttggagctcaagtgc 33
Query: 1134 ttcgccggtctcagacgtttttggagggaatg 1165
||||||||||||||||||||||||||||||||
Sbjct: 32 ttcgccggtctcagacgtttttggagggaatg 1
>KJC_c00873
Length = 801
Score = 908 bits (458), Expect = 0.0
Identities = 472/474 (99%), Gaps = 2/474 (0%)
Strand = Plus / Plus
Query: 1173 agctcctcagcaacctggtcggtctgatcagggagccaaggagattaggatgttggtcgc 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 agctcctcagcaacctggtcggtctgatcagggagccaaggagattaggatgttggtcgc 64
Query: 1233 tgaccatccacaaaatgggg-aaagcaaagctatcgcaaatgctggagattttcctggcg 1291
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 65 tgaccatccacaaaatgggggaaagcaaagctatcgcaaatgctggagattt-cctggcg 123
Query: 1292 aggacttcagtttcgctggtaaaggagatggagaagaagatgataaagaaaaagagggag 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aggacttcagtttcgctggtaaaggagatggagaagaagatgataaagaaaaagagggag 183
Query: 1352 cgcccggacttaataaactggggtccagttcaactgcagagctccacccaaaagttggcg 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cgcccggacttaataaactggggtccagttcaactgcagagctccacccaaaagttggcg 243
Query: 1412 gaccacccgagtccggtgccaacaaacaaatgccaccagcgagtgttatgacccgtctga 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gaccacccgagtccggtgccaacaaacaaatgccaccagcgagtgttatgacccgtctga 303
Query: 1472 tattgatcatggtttggcgaaaactgattaggaatcccaacacatactccagtctcattg 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tattgatcatggtttggcgaaaactgattaggaatcccaacacatactccagtctcattg 363
Query: 1532 gcctggtctggtctctaatttctttccgatggcatgtggctatgcctaaaataataaagc 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gcctggtctggtctctaatttctttccgatggcatgtggctatgcctaaaataataaagc 423
Query: 1592 agtcaatctccatcctgtctgatgctggtcttggaatggctatgttcagcttag 1645
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agtcaatctccatcctgtctgatgctggtcttggaatggctatgttcagcttag 477
>KJC_s17424
Length = 264
Score = 224 bits (113), Expect = 5e-58
Identities = 113/113 (100%)
Strand = Plus / Minus
Query: 1074 aaatactaaagcaaaccatgatgctaaagaactacacatgtttgtttggagctcaagtgc 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 aaatactaaagcaaaccatgatgctaaagaactacacatgtttgtttggagctcaagtgc 54
Query: 1134 ttcgccggtctcagacgtttttggagggaatgatttcggagctcctcagcaac 1186
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ttcgccggtctcagacgtttttggagggaatgatttcggagctcctcagcaac 1
Score = 151 bits (76), Expect = 6e-36
Identities = 102/107 (95%), Gaps = 4/107 (3%)
Strand = Plus / Minus
Query: 920 ctccgagattcgggttttacccggcccagactgtaccaacatcctacccggctccgaatc 979
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctccgagat-cgggttttacc-ggcccagactgtaccaacatcctacccggctccgaatc 207
Query: 980 cggaattttcttctactgtttctacaaaaaacaccaagaatcaggcc 1026
||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 206 cggaattttcttctactgtttct--caaaaacaccaagaatcaggcc 162
>KJC_c02600
Length = 920
Score = 198 bits (100), Expect = 3e-50
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1546 ctaatttctttccgatggcatgtggctatgcctaaaataataaagcagtcaatctccatc 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaatttctttccgatggcatgtggctatgcctaaaataataaagcagtcaatctccatc 60
Query: 1606 ctgtctgatgctggtcttggaatggctatgttcagcttag 1645
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgtctgatgctggtcttggaatggctatgttcagcttag 100
>KJC_c03298
Length = 890
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1480 atggtttggcgaaaactgattaggaatcccaacacatactccagtctcattggcct 1535
||||||||| ||||||| || ||||||||||| || || |||||||||||||||||
Sbjct: 203 atggtttggagaaaacttataaggaatcccaatacttattccagtctcattggcct 258