Jatropha Genome Database

JcCB0025591.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0025591.10 + phase: 0 /partial/short
         (78 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02600                                                            131   2e-31
KJC_c00873                                                            131   2e-31

>KJC_c02600 
          Length = 920

 Score =  131 bits (66), Expect = 2e-31
 Identities = 66/66 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggcaaatgcagcgacagaattcccacaagcaattatctttggttgtaacgccataaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 atggcaaatgcagcgacagaattcccacaagcaattatctttggttgtaacgccataaac 105

                 
Query: 61  agacct 66
           ||||||
Sbjct: 104 agacct 99


>KJC_c00873 
          Length = 801

 Score =  131 bits (66), Expect = 2e-31
 Identities = 66/66 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggcaaatgcagcgacagaattcccacaagcaattatctttggttgtaacgccataaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atggcaaatgcagcgacagaattcccacaagcaattatctttggttgtaacgccataaac 482

                 
Query: 61  agacct 66
           ||||||
Sbjct: 481 agacct 476