Jatropha Genome Database
- JcCB0024231.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0024231.10 + phase: 0
(1314 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03168 125 3e-28
KJC_c02448 119 2e-26
KJC_c03906 115 3e-25
KJC_c12118 111 4e-24
KJC_c10306 103 1e-21
KJC_c06446 84 1e-15
KJC_c05837 76 2e-13
>KJC_c03168
Length = 846
Score = 125 bits (63), Expect = 3e-28
Identities = 153/183 (83%)
Strand = Plus / Plus
Query: 340 gttcaccatgatccgtcaagagctctcggtgatctcaccggaataaaaaagcatttcagc 399
||||| || ||||| || |||||| | || ||||| || || ||||| |||||||| ||
Sbjct: 83 gttcatcacgatccatctagagctttaggcgatcttacagggataaagaagcatttttgc 142
Query: 400 agaaaacatggagaaaagaaatggaagtgtgagaaatgctcaaagaaatatgcagttcaa 459
|| ||||| || || ||||| ||||| || || || || || |||||||||||||||||
Sbjct: 143 aggaaacacggcgagaagaagtggaaatgcgataagtgttcgaagaaatatgcagttcag 202
Query: 460 tctgactggaaagctcactccaagacttgtgggactagagaatataaatgcgattgtgga 519
||||| ||||||||||||||||| | |||||| ||||| |||||||||||||||||||||
Sbjct: 203 tctgattggaaagctcactccaaaatttgtggcactagggaatataaatgcgattgtgga 262
Query: 520 act 522
|||
Sbjct: 263 act 265
>KJC_c02448
Length = 719
Score = 119 bits (60), Expect = 2e-26
Identities = 246/308 (79%)
Strand = Plus / Minus
Query: 214 aaaggtttccaaagagatcaaaacttgcagctccatcgaagaggtcataatcttccatgg 273
||||| || |||||||||||||| | || || ||| ||||||||||||| || ||||||
Sbjct: 663 aaaggatttcaaagagatcaaaatcttcaacttcatagaagaggtcataacctgccatgg 604
Query: 274 aagttaaggcaacgaacgaacaaagaagtcaaaaagaaagtttatatatgcccggaaaag 333
||||||| |||| |||| ||||| ||||| | ||||| || ||| |||| || |||
Sbjct: 603 aagttaaagcaaagaacaaacaaggaagtgaggaagaaggtatatgtatgtccagaagct 544
Query: 334 acctgcgttcaccatgatccgtcaagagctctcggtgatctcaccggaataaaaaagcat 393
|| || || || ||||| || ||||||||||| || || || || ||||| ||||| |
Sbjct: 543 acatgtgtacatcatgacccatcaagagctctaggagaccttacaggaatcaaaaacaac 484
Query: 394 ttcagcagaaaacatggagaaaagaaatggaagtgtgagaaatgctcaaagaaatatgca 453
|| |||||||| ||||| || ||||| ||||||||||| || ||||| || |||||
Sbjct: 483 tttagcagaaagcatggtgagaagaagtggaagtgtgaaaagtgctctaaacgttatgcc 424
Query: 454 gttcaatctgactggaaagctcactccaagacttgtgggactagagaatataaatgcgat 513
|||||||||||||||||||| || ||||||| |||||| || ||||| |||| ||| |||
Sbjct: 423 gttcaatctgactggaaagcccattccaagatttgtggcacaagagagtatagatgtgat 364
Query: 514 tgtggaac 521
|| |||||
Sbjct: 363 tgcggaac 356
>KJC_c03906
Length = 556
Score = 115 bits (58), Expect = 3e-25
Identities = 106/122 (86%)
Strand = Plus / Minus
Query: 400 agaaaacatggagaaaagaaatggaagtgtgagaaatgctcaaagaaatatgcagttcaa 459
|||||||||||||||||||||||||| ||||| ||||| ||||||| || || ||||||
Sbjct: 347 agaaaacatggagaaaagaaatggaaatgtgaaaaatgttcaaagatctacgctgttcaa 288
Query: 460 tctgactggaaagctcactccaagacttgtgggactagagaatataaatgcgattgtgga 519
||||| ||||||||||| || || |||||||| |||||||| |||| ||| || ||||||
Sbjct: 287 tctgattggaaagctcattctaaaacttgtggaactagagagtatagatgtgactgtgga 228
Query: 520 ac 521
||
Sbjct: 227 ac 226
>KJC_c12118
Length = 661
Score = 111 bits (56), Expect = 4e-24
Identities = 312/396 (78%), Gaps = 1/396 (0%)
Strand = Plus / Minus
Query: 124 cctggaacaccagatccagatgctgaggttattgctttatctccgaagactcttatggct 183
|||||||||||| ||||||| || ||||| || || ||||||| ||||| || |||||
Sbjct: 401 cctggaacaccaaatccagacgcagaggtgatagcactatctcccaagacactaatggca 342
Query: 184 acaaaccgattcgtatgcgaaatatgcaataaaggtttccaaagagatcaaaacttgcag 243
|||||| | ||| |||| || ||||||| ||||| ||||| || || |||||| | |||
Sbjct: 341 acaaacaggttcatatgtgaggtatgcaacaaagggttccagagggagcaaaacctacag 282
Query: 244 ctccatcgaagaggtcataatcttccatggaagttaaggcaacgaacgaacaaagaagtc 303
||||| ||||||| || || || || |||||| ||| ||| ||| | ||||||||
Sbjct: 281 ctccacagaagaggacacaacctaccttggaagctaaagcagaaaactacaaaagaagtg 222
Query: 304 aaaaagaaagtttatatatgcccggaaaagacctgcgttcaccatgatccgtcaagagct 363
|| | |||||| ||| ||||||| ||| || ||||| |||||||| || || || |||
Sbjct: 221 aagaggaaagtgtatttatgccctgaacccacatgcgtccaccatgacccttctagggct 162
Query: 364 ctcggtgatctcaccggaataaaaaagcatttcagcagaaaacatggaga-aaagaaatg 422
|| ||||| || || || || || || || | ||||||||||| || ||| |||||
Sbjct: 161 cttggtgaccttactggtatcaagaaacactattcaagaaaacatggtgagaaaaaaatg 102
Query: 423 gaagtgtgagaaatgctcaaagaaatatgcagttcaatctgactggaaagctcactccaa 482
||||||||||||||| ||||||| |||||| || |||||||| |||||||| || || ||
Sbjct: 101 gaagtgtgagaaatgttcaaagagatatgctgtgcaatctgattggaaagcccattctaa 42
Query: 483 gacttgtgggactagagaatataaatgcgattgtgg 518
||||||||| || |||||||||| ||| || |||||
Sbjct: 41 gacttgtggcaccagagaatatagatgtgactgtgg 6
>KJC_c10306
Length = 589
Score = 103 bits (52), Expect = 1e-21
Identities = 148/180 (82%)
Strand = Plus / Minus
Query: 106 aagaagaagagaaatttgcctggaacaccagatccagatgctgaggttattgctttatct 165
||||| ||||||||| ||||||||||||| |||||||||| || || || || |||||
Sbjct: 236 aagaaaaagagaaatcagcctggaacaccaaatccagatgcagaagtgatagcactatct 177
Query: 166 ccgaagactcttatggctacaaaccgattcgtatgcgaaatatgcaataaaggtttccaa 225
|| ||||| || ||||| |||||| | ||| |||| ||| ||||||| |||||||| |||
Sbjct: 176 cccaagacactgatggcaacaaacaggttcatatgtgaagtatgcaacaaaggttttcaa 117
Query: 226 agagatcaaaacttgcagctccatcgaagaggtcataatcttccatggaagttaaggcaa 285
||||| |||||| | |||||||| ||||||| || || || ||||||||| ||| ||||
Sbjct: 116 agagagcaaaacctacagctccacagaagaggacacaacctcccatggaagctaaagcaa 57
>KJC_c06446
Length = 815
Score = 83.8 bits (42), Expect = 1e-15
Identities = 106/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 398 gcagaaaacatggagaaaagaaatgg-aagtgtgagaaatgctcaaagaaatatgcagtt 456
||||||| ||||| || ||||| ||| || ||||| || |||||||||| ||||| |||
Sbjct: 309 gcagaaagcatggtgagaagaagtgggaaatgtgataagtgctcaaagaggtatgcggtt 250
Query: 457 caatctgactggaaagctcactccaagacttgtgggactagagaatataaatgcgattgt 516
||||| || ||||||||||||||||| || ||||| ||||||||||| | ||| || |||
Sbjct: 249 caatcagattggaaagctcactccaaaacatgtggcactagagaatacagatgtgactgt 190
Query: 517 ggaact 522
||||||
Sbjct: 189 ggaact 184
>KJC_c05837
Length = 885
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 415 aagaaatggaagtgtgagaaatgctcaaagaaatatgcagttcaatctgactggaaagct 474
||||| |||||||||||| ||||| |||||||||||||| ||||| || ||||| ||
Sbjct: 569 aagaagtggaagtgtgagcggtgctcgaagaaatatgcagtacaatccgattggaaggcc 510
Query: 475 cactccaagacttgtgggactagagaatataaatgcgattgtggaacttt 524
||| || |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 509 cacatgaaaacttgtggaactagagagtataaatgcgattgcggcacttt 460
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 106 aagaagaagagaaatttgcctggaacaccagatccagatgctgaggttattgctttatct 165
||||||||||||||| | ||||||| ||||||||||||||||| || || ||||||||
Sbjct: 876 aagaagaagagaaatctccctggaatgccagatccagatgctgaagtgatagctttatcg 817
Query: 166 ccgaagactct 176
|| ||||||||
Sbjct: 816 ccaaagactct 806