Jatropha Genome Database
- JcCB0019281.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0019281.10 - phase: 0
(2598 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c11096 779 0.0
KJC_c00522 165 7e-40
KJC_c00350 155 6e-37
KJC_c00685 74 2e-12
KJC_c07455 70 3e-11
KJC_s13495 64 2e-09
KJC_s14684 58 1e-07
KJC_c00488 58 1e-07
KJC_s18034 56 4e-07
KJC_c03025 56 4e-07
KJC_c02336 56 4e-07
>KJC_c11096
Length = 528
Score = 779 bits (393), Expect = 0.0
Identities = 414/417 (99%), Gaps = 3/417 (0%)
Strand = Plus / Minus
Query: 1 atggtttcaaggtcttattcaaacctcttggatcttgcttctggtcagtctccaaccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atggtttcaaggtcttattcaaacctcttggatcttgcttctggtcagtctccaaccctt 356
Query: 61 agtcgtgagaggaagaggctccctcgggtggcaactgttgctggagtattgtctgaacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agtcgtgagaggaagaggctccctcgggtggcaactgttgctggagtattgtctgaacta 296
Query: 121 gacgatgaaaacagcaacagtgtaagctctgatgctccctcatctatctctcaagagcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gacgatgaaaacagcaacagtgtaagctctgatgctccctcatctatctctcaagagcgg 236
Query: 181 atgatcattgtgggaaaccagcttcctcttcgggcatataaaagtccagatggcagtggg 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 235 atgatcattgtgggaaaccagcttcctcttcgggcatat-aaagtccagatggcagtggg 177
Query: 241 gagtggtgctttagctgggatgaggactcacttcttttacaactcaaagatggtcttgga 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 176 gagtggtgctttagctgggatgaggactcacttc-tttacaactcaaagatggtcttgga 118
Query: 301 gaagatgtagaagttatctatgttggttgtcttaaagaagagattgacctcagtgagcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gaagatgtagaagttatctatgttggttgtcttaaagaagagattgacctcagtgagcaa 58
Query: 361 gatgatgtagctcaaatattgctcg-agtctttcaaatgtgtcccggcttatatccc 416
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 57 gatgatgtagctcaaatattgctcgaagtctttcaaatgtgtcccggcttatatccc 1
>KJC_c00522
Length = 1183
Score = 165 bits (83), Expect = 7e-40
Identities = 227/275 (82%)
Strand = Plus / Plus
Query: 562 tttgcagacaaagtaatggaagtgattagtcctgatgatgattacgtgtgggttcatgac 621
||||||||||| || |||||| | || ||||| || || ||||| || ||||||||||||
Sbjct: 748 tttgcagacaaggtcatggaaataatcagtccagaggaagattatgtttgggttcatgac 807
Query: 622 taccatttgatggttttgccgacatttttgaggaagaggtttaatagggtgaagctaggg 681
|| || || ||| || ||||||| ||||||||||| | | ||| | || ||||| |||
Sbjct: 808 tatcacttaatgcttctgccgacctttttgaggaaaggctacaatcgagtcaagcttggg 867
Query: 682 ttcttccttcatagtccatttccatcatcggaaatatacaggactcttcctgttagagat 741
||||||||||| ||||||||||| ||||| ||||||||||||||| | || || ||||||
Sbjct: 868 ttcttccttcacagtccatttccttcatcagaaatatacaggactttgccagtcagagat 927
Query: 742 gaacttctgagagcacttcttaatgctgatcttattgggtttcatacttttgattatgca 801
||| ||||||| | ||||| ||| |||||| ||||| |||||||| ||||| ||||||
Sbjct: 928 gaaattctgagggggcttctgaattgtgatctaattggttttcatacatttgactatgca 987
Query: 802 aggcacttcctctcttgctgtagtagaatgcttgg 836
| ||||| ||||| ||||| ||||||||||||||
Sbjct: 988 cgacactttctctcatgctgcagtagaatgcttgg 1022
>KJC_c00350
Length = 3598
Score = 155 bits (78), Expect = 6e-37
Identities = 273/338 (80%)
Strand = Plus / Minus
Query: 598 gatgattacgtgtgggttcatgactaccatttgatggttttgccgacatttttgaggaag 657
||||||| ||||||||| |||||||| ||| | ||||| |||| || ||| | ||||||
Sbjct: 2236 gatgatttcgtgtgggtgcatgactatcatcttatggtgctgccaacttttcttaggaag 2177
Query: 658 aggtttaatagggtgaagctagggttcttccttcatagtccatttccatcatcggaaata 717
|||||||||||||| ||||| || || || || || ||||| || || ||||| || ||
Sbjct: 2176 aggtttaatagggtaaagcttggcttttttctccacagtcctttcccttcatcagagatt 2117
Query: 718 tacaggactcttcctgttagagatgaacttctgagagcacttcttaatgctgatcttatt 777
|| | ||| | ||| ||||||| || |||| |||| || | ||| ||||| | |||
Sbjct: 2116 tataagacattgcctattagagaagagattcttcgagctctgttaaattctgatttgatt 2057
Query: 778 gggtttcatacttttgattatgcaaggcacttcctctcttgctgtagtagaatgcttggt 837
|| || ||||||||||| ||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 2056 ggtttccatacttttgactatgcaaggcatttcttgtcttgctgtagtagaatgcttggt 1997
Query: 838 ctttcttatcaatctaagcgtggttatatagggcttgagtattatggtcgcactgtaagc 897
||| | ||| |||| || | || |||||||| |||||||||| |||| | |||||||||
Sbjct: 1996 cttacctatgaatccaaaaggggatatataggccttgagtattgtggtaggactgtaagc 1937
Query: 898 ataaagattcttcctgttgggattcatataggccagct 935
||||| ||||| |||||||| |||||||| || |||||
Sbjct: 1936 ataaaaattctgcctgttggtattcatatgggtcagct 1899
Score = 133 bits (67), Expect = 2e-30
Identities = 289/363 (79%)
Strand = Plus / Minus
Query: 1444 tttatagggtgctccccatcattgagtggagcaattcgagtgaatccatggaacattgat 1503
|||||||| || || ||||| |||||||||||||||||||| || |||||||| ||||||
Sbjct: 1384 tttataggatgttctccatctttgagtggagcaattcgagtcaacccatggaatattgat 1325
Query: 1504 gctgtagctgaagctatggattctgctttaatagtccctgagccagaaaaacaaatgagg 1563
|| || ||||| || ||||| | || | | | ||||||||||||||||| | |
Sbjct: 1324 gcagtggctgatgcaatggactgcgcactggaaatggctgagccagaaaaacaacttcga 1265
Query: 1564 catgagaagcaccataggtatgtgagtactcatgatgttgcatattgggcacgtagcttt 1623
||||| ||||| | | ||||| |||||||||||||||| |||||||||||||| |||
Sbjct: 1264 catgacaagcattacaaatatgttagtactcatgatgttggttattgggcacgtagtttt 1205
Query: 1624 cttcaggatctggagagggcctgcagggatcacttgaggaggaggtgctggggtattgga 1683
||||||||| |||||||| | || | |||||| |||||||| ||||||||||||||
Sbjct: 1204 cttcaggatttggagaggacatgtcgtgatcacgcaaggaggagatgctggggtattggt 1145
Query: 1684 tttggtttaggttttcgagtaattgccttggatccaaatttcagaaaactttcacttgaa 1743
||||| ||| | || |||| | || | |||||||| ||||| || || ||| | ||
Sbjct: 1144 tttggattaagcttcagagttgtagcacttgatccaaacttcaggaagctctcaatggag 1085
Query: 1744 catattgtatcagcttataagaggaccaagaatcgagcaattcttttagattatgatggt 1803
|| ||||| |||||||| |||||||||| | | | ||||||||||| ||||||||||||
Sbjct: 1084 cacattgtctcagcttacaagaggaccacaattagggcaattcttttggattatgatggt 1025
Query: 1804 act 1806
|||
Sbjct: 1024 act 1022
Score = 113 bits (57), Expect = 2e-24
Identities = 195/241 (80%)
Strand = Plus / Minus
Query: 2144 atgcagatccggactttggctcttgccaggcaaaggagcttctagatcatctagaaagtg 2203
||||||||||||||||||| || ||||| || || || ||||| |||||||| |||||||
Sbjct: 684 atgcagatccggactttggttcatgccaagctaaagaacttcttgatcatcttgaaagtg 625
Query: 2204 ttctttcaaatgagccagtttctgtcaagagtggccaacatattgtagaagttaaacctc 2263
| | | ||||| || || | ||||||||||| ||| ||| ||| || ||||||||||
Sbjct: 624 tcttagccaatgaacctgtaacagtcaagagtggacaaaatactgtggaggttaaacctc 565
Query: 2264 agggtgtgaacaaaggggtcgtggcacaatgcctcctcgagacaatgcaacagaagggaa 2323
||||||| | ||| ||| |||| || ||||||| || |||||||||| | | |||||
Sbjct: 564 agggtgtaagcaaggggctcgtagccaaatgcctactttcgacaatgcaagaaaggggaa 505
Query: 2324 tgcttcctgattttgttctctgcattggagatgaccggtcagatgaagacatgtttgagg 2383
|| || ||||||||| | |||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 504 tgtcaccagattttgttttgtgcattggagatgaccggtccgatgaagatatgttcgagg 445
Query: 2384 t 2384
|
Sbjct: 444 t 444
Score = 67.9 bits (34), Expect = 1e-10
Identities = 109/134 (81%)
Strand = Plus / Minus
Query: 1117 ttggttcaaatagccaaccctgcaagaggccgaggaaaggacgtgcaagaggtcaaatct 1176
||||| |||||||| ||||||||||| || |||||| || ||| |||| || || ||
Sbjct: 1711 ttggtgcaaatagcaaaccctgcaaggggtaaaggaaaagatgtgaaagaagttcaagct 1652
Query: 1177 gaaactaaagccacagtgaggaggattaatgagacatttggaagaccaggatatgatcca 1236
|| ||| | |||| |||| |||||||||||| |||||||||| ||||||||||||||
Sbjct: 1651 gagacttattccacggtgaagaggattaatgaagcatttggaaggccaggatatgatcct 1592
Query: 1237 gtggttttaattga 1250
|| || ||||||||
Sbjct: 1591 gtagtcttaattga 1578
>KJC_c00685
Length = 3018
Score = 73.8 bits (37), Expect = 2e-12
Identities = 106/129 (82%)
Strand = Plus / Minus
Query: 598 gatgattacgtgtgggttcatgactaccatttgatggttttgccgacatttttgaggaag 657
|||||||| || ||| |||||||||| ||||||||||| | || ||||||||||| |
Sbjct: 2236 gatgattatgtttggattcatgactatcatttgatggtgctacccacatttttgagaaga 2177
Query: 658 aggtttaatagggtgaagctagggttcttccttcatagtccatttccatcatcggaaata 717
||||||||||| ||| | |||||||| || |||||||||||||| || || || |||
Sbjct: 2176 aggtttaatagattgagaatggggttctttctccatagtccatttccttcgtctgagata 2117
Query: 718 tacaggact 726
|||||||||
Sbjct: 2116 tacaggact 2108
>KJC_c07455
Length = 700
Score = 69.9 bits (35), Expect = 3e-11
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 706 tcatcggaaatatacaggactcttcctgttagagatgaacttctgagagcacttcttaat 765
||||| ||||| ||| | ||||| || |||||||||||| |||||| |||||| || |||
Sbjct: 250 tcatcagaaatttaccgaactctgccagttagagatgaaattctgaaagcactgctgaat 191
Query: 766 gctgatcttattgggtttcatacttttgattatgc 800
|| ||| | ||||| |||||||| |||||||||||
Sbjct: 190 gcagatttaattggttttcatacatttgattatgc 156
>KJC_s13495
Length = 220
Score = 63.9 bits (32), Expect = 2e-09
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 1187 ccacagtgaggaggattaatgagacatttggaagaccaggatatgatccagtggttttaa 1246
|||| |||| |||||||||||| |||||||||| |||||||||||||| || || ||||
Sbjct: 20 ccacggtgaagaggattaatgaagcatttggaaggccaggatatgatcctgtagtcttaa 79
Query: 1247 ttga 1250
||||
Sbjct: 80 ttga 83
>KJC_s14684
Length = 453
Score = 58.0 bits (29), Expect = 1e-07
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 2344 tgcattggagatgaccggtcagatgaagacatgtttgaggt 2384
|||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 422 tgcattggagatgaccggtccgatgaagatatgttcgaggt 382
>KJC_c00488
Length = 2467
Score = 58.0 bits (29), Expect = 1e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 768 tgatcttattgggtttcatacttttgattatgcaaggcacttcctctcttgctgtagtag 827
||||||| |||| ||||||||||||||||||||| | || ||| | ||||| ||||||||
Sbjct: 914 tgatcttgttggatttcatacttttgattatgcacgacatttcttgtcttgttgtagtag 973
Query: 828 a 828
|
Sbjct: 974 a 974
>KJC_s18034
Length = 127
Score = 56.0 bits (28), Expect = 4e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 2144 atgcagatccggactttggctcttgccaggcaaaggagcttctagatcatctagaaagtg 2203
|||| ||||| || ||||| ||||||||||||||||| || | |||||||| |||| ||
Sbjct: 91 atgctgatccagattttggatcttgccaggcaaaggaactgttggatcatcttgaaaatg 32
Query: 2204 ttctttcaaatgagcc 2219
| ||| ||||||||||
Sbjct: 31 tccttgcaaatgagcc 16
>KJC_c03025
Length = 550
Score = 56.0 bits (28), Expect = 4e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 2144 atgcagatccggactttggctcttgccaggcaaaggagcttctagatcatctagaaagtg 2203
|||| ||||| || ||||| ||||||||||||||||| || | |||||||| |||| ||
Sbjct: 38 atgctgatccagattttggatcttgccaggcaaaggaactgttggatcatcttgaaaatg 97
Query: 2204 ttctttcaaatgagcc 2219
| ||| ||||||||||
Sbjct: 98 tccttgcaaatgagcc 113
>KJC_c02336
Length = 967
Score = 56.0 bits (28), Expect = 4e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 2188 gatcatctagaaagtgttctttcaaatgagccagtttctgtcaagagtggccaacatatt 2247
|||||||| |||| ||| ||| ||||||| |||| | ||| ||| | ||||||||||||
Sbjct: 620 gatcatcttgaaaatgtccttgcaaatgaaccagctgttgttaagcggggccaacatatt 561
Query: 2248 gtagaagttaaacctcaggg 2267
|| ||||||||||| |||||
Sbjct: 560 gttgaagttaaaccacaggg 541