Jatropha Genome Database
- JcCB0018351.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0018351.10 + phase: 0 /partial
(1379 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00518 98 7e-20
KJC_c02028 82 4e-15
KJC_c08310 80 2e-14
KJC_c01372 70 2e-11
KJC_c06719 52 4e-06
>KJC_c00518
Length = 1259
Score = 97.6 bits (49), Expect = 7e-20
Identities = 127/153 (83%)
Strand = Plus / Minus
Query: 801 tgatgatggctacaattggcgaaaatatgggcagaaacaggtgaaaggcagtgaatttcc 860
||||||||||||||| ||||| |||||||||||||| | | || |||||||||| |||
Sbjct: 571 tgatgatggctacaactggcgcaaatatgggcagaagccaattaagggcagtgaatatcc 512
Query: 861 tcgaagttattataaatgcacacatcccaattgtcctgtcaagaaaaaggttgagcgatc 920
| || ||||| |||||||||||||| ||||||||||| || || ||||||||||| ||
Sbjct: 511 aaggagctattacaaatgcacacatccgaattgtcctgttaaaaagaaggttgagcgttc 452
Query: 921 tcttgatggtcaagtgactgaaattatctacaa 953
| |||||| ||| | ||||| || ||||||||
Sbjct: 451 tagtgatggccaaataactgagatcatctacaa 419
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1281 aatcattgtgcagactaccagtgaagttgatctcttggatgatggctatagatggcgaaa 1340
||||||||| || |||| |||||||||||||| || ||||||||||| || ||||| ||
Sbjct: 67 aatcattgttcaaactagaagtgaagttgatcttttagatgatggctacaggtggcgcaa 8
Query: 1341 atatgg 1346
||||||
Sbjct: 7 atatgg 2
>KJC_c02028
Length = 966
Score = 81.8 bits (41), Expect = 4e-15
Identities = 122/149 (81%)
Strand = Plus / Minus
Query: 805 gatggctacaattggcgaaaatatgggcagaaacaggtgaaaggcagtgaatttcctcga 864
||||| ||||||||| |||| ||||||||||| |||||||| || ||||||| |||| |
Sbjct: 345 gatggatacaattggagaaagtatgggcagaagcaggtgaagggtagtgaatatcctagg 286
Query: 865 agttattataaatgcacacatcccaattgtcctgtcaagaaaaaggttgagcgatctctt 924
|| || ||||| || || ||||| ||||||| || |||||||| ||||||| || | |
Sbjct: 285 agctactataagtgtacgcatccaaattgtcaggtgaagaaaaaaattgagcgttcacat 226
Query: 925 gatggtcaagtgactgaaattatctacaa 953
|| |||||| | |||||||| ||||||||
Sbjct: 225 gacggtcaaataactgaaatcatctacaa 197
>KJC_c08310
Length = 601
Score = 79.8 bits (40), Expect = 2e-14
Identities = 94/112 (83%)
Strand = Plus / Minus
Query: 803 atgatggctacaattggcgaaaatatgggcagaaacaggtgaaaggcagtgaatttcctc 862
||||||| || |||||| ||||||||||||| || || || ||||| ||||| | ||| |
Sbjct: 221 atgatggttataattggagaaaatatgggcaaaagcaagtaaaaggaagtgagtatccac 162
Query: 863 gaagttattataaatgcacacatcccaattgtcctgtcaagaaaaaggttga 914
||||||| || || ||||||||||| |||||||| || || |||||||||||
Sbjct: 161 gaagttactacaagtgcacacatccaaattgtccagtaaaaaaaaaggttga 110
>KJC_c01372
Length = 646
Score = 69.9 bits (35), Expect = 2e-11
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 800 ctgatgatggctacaattggcgaaaatatgggcagaaacaggtgaaaggcagtgaatttc 859
|||| ||||| || || ||| |||| ||||| |||||||| || || ||||| |||| ||
Sbjct: 324 ctgaagatggatataactggagaaagtatggacagaaacaagtaaagggcagcgaatatc 265
Query: 860 ctcgaagttattataaatgcacacatcccaattgtcctgtcaagaaaaaggttga 914
| || |||||||| |||||||||||||| ||||||| ||||| || ||||||||
Sbjct: 264 cacggagttattacaaatgcacacatccaaattgtctagtcaaaaagaaggttga 210
>KJC_c06719
Length = 480
Score = 52.0 bits (26), Expect = 4e-06
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 1273 gagcctagaatcattgtgcagactaccagtgaagttgatctcttggatgatggctataga 1332
||||||||| | |||| |||||||| ||||| || ||| || | |||||||| ||| |
Sbjct: 163 gagcctagagtagttgtccagactacaagtgaggtggatatccttgatgatggatatcgc 104
Query: 1333 tggcgaaaatatggacagaaagttgt 1358
||||| |||||||| |||||||||||
Sbjct: 103 tggcgcaaatatgggcagaaagttgt 78