Jatropha Genome Database

JcCB0017431.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0017431.10 - phase: 0 
         (1623 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10659                                                            930   0.0  

>KJC_c10659 
          Length = 892

 Score =  930 bits (469), Expect = 0.0
 Identities = 472/473 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggattcaaacggccttttgatagtgatgagttccaggagcttccttttaagcaggct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atgggattcaaacggccttttgatagtgatgagttccaggagcttccttttaagcaggct 465

                                                                       
Query: 61  agacagttggacttcggcaataacttgactcagtttgcacatttgtataaaactacatcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 agacagttggacttcggcaataacttgactcagtttgcacatttgtataaaactacatcc 525

                                                                       
Query: 121 ctggcacttgatgttacagatgattatgatagaggctttgtaaaatctcaacatcatcac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ctggcacttgatgttacagatgattatgatagaggctttgtaaaatctcaacatcatcac 585

                                                                       
Query: 181 acatttgaaaataacactgtctttgaagttccaaatttctcaagagatattgagatcagt 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 586 acatttgaaaataacactgtctttgaagttccaaattcctcaagagatattgagatcagt 645

                                                                       
Query: 241 gctcctttgtctttggtcacgagcagttctagtgatgaagatgttggttccagggcagca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gctcctttgtctttggtcacgagcagttctagtgatgaagatgttggttccagggcagca 705

                                                                       
Query: 301 gcagcagcttacccttattctcaggggcattctgaatttgattttcctcggagatttgtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gcagcagcttacccttattctcaggggcattctgaatttgattttcctcggagatttgtt 765

                                                                       
Query: 361 ccttttgaggatgcctactgttcatacttggaccgttctcctagaagacaagttcctctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ccttttgaggatgcctactgttcatacttggaccgttctcctagaagacaagttcctctt 825

                                                                
Query: 421 ggaccaaatcatcaagctagcattccaatttggggtgggcatttaaagaaccc 473
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 ggaccaaatcatcaagctagcattccaatttggggtgggcatttaaagaaccc 878