Jatropha Genome Database
- JcCB0017001.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0017001.10 - phase: 0 /partial
(1192 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05923 1132 0.0
>KJC_c05923
Length = 625
Score = 1132 bits (571), Expect = 0.0
Identities = 615/623 (98%), Gaps = 5/623 (0%)
Strand = Plus / Plus
Query: 440 atggcagcaagcctacgaaaacaaaggga-ggtttggctgctggaactgccacatcaaat 498
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 atggcagcaagcctacgaaa-caaagggaaggtttggctgctggaactgccacatcaaat 59
Query: 499 -ctctttcgcaatccgaactacaaaactgcaatggaggcaatgaactccaaatgctgcag 557
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 actctttcgcaatccgaactacaaaactgcaatggaggcaatgaactccaaatgctgcag 119
Query: 558 tccagatgaagtaatatttggtcctgacttccatcaatcattatactgccatctcttatg 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tccagatgaagtaatatttggtcctgacttccatcaatcattatactgccatctcttatg 179
Query: 618 cggattaatcttttctgaagaaattgagctcgtgtcctctacatttgctcatagcattgt 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cggattaatcttttctgaagaaattgagctcgtgtcctctacatttgctcatagcattgt 239
Query: 678 tattgcatttagaacctttgaacaagtctggcaagagctctgtaatgatattcgggatgg 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tattgcatttagaacctttgaacaagtctggcaagagctctgtaatgatattcgggatgg 299
Query: 738 tgaacttagtaatcgagtaactgcaccttctatcagaacagcaatgtccaaagtgctcaa 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tgaacttagtaatcgagtaactgcaccttctatcagaacagcaatgtccaaagtgctcaa 359
Query: 798 gccaaaccctgaattggctgatttgatccatagaaaatgctcaggattgaataattggta 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gccaaaccctgaattggctgatttgatccatagaaaatgctcaggattgaataattggta 419
Query: 858 tggattaataccagaactctttcctaatgtgaagtatatctatggaataatgactgggtc 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tggattaataccagaactctttcctaatgtgaagtatatctatggaataatgactgggtc 479
Query: 918 gatggagccttatttgaagaaattgaggcactatgcaggcgaggtgcctttgctgtgtgc 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gatggagccttatttgaagaaattgaggcactatgcaggcgaggtgcctttgctgtgtgc 539
Query: 978 cgattatggtgcctcagaggggtggattgcagcaaacgtcaacccgaagtt-gcctccag 1036
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 540 cgattatggtgcctcagaggggtggattgcagcaaacgtcaacccgaagttcgcct-cag 598
Query: 1037 aactggctacttttgctgtgttg 1059
|||||||| ||||||||||||
Sbjct: 599 aactggcttactttgctgtgttg 621