Jatropha Genome Database
- JcCB0016411.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0016411.10 - phase: 0 /partial
(945 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03265 1600 0.0
>KJC_c03265
Length = 1249
Score = 1600 bits (807), Expect = 0.0
Identities = 828/831 (99%), Gaps = 3/831 (0%)
Strand = Plus / Plus
Query: 115 gtctcagctttcctagaaatccatgatatagctggactagttagaggtgctcatgaaggg 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gtctcagctttcctagaaatccatgatatagctggactagttagaggtgctcatgaaggg 407
Query: 175 caaggcctgggcaacagtttcttatctcacatccgtgcagttgatggcatttttcatgtg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 408 caaggcctgggcaacagtttcttatctcacatccgtgcagttgatggcatttt-catgtg 466
Query: 235 ttacgtgcatttgaagatccagacattattcatgttgatgactctgtggatcctgtgaga 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ttacgtgcatttgaagatccagacattattcatgttgatgactctgtggatcctgtgaga 526
Query: 295 gatctagaggttattggtgctgagttacggctaaaggatcttgaatttattgagagaaga 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gatctagaggttattggtgctgagttacggctaaaggatcttgaatttattgagagaaga 586
Query: 355 atagaggatattgagaagagcatgaagaggagcaatgacaaacagctaaaaatagagcat 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 atagaggatattgagaagagcatgaagaggagcaatgacaaacagctaaaaatagagcat 646
Query: 415 gagatgtgtcaaaaggtcaaggcatggcttgaagatgggaaagatgtccgcctaggagac 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gagatgtgtcaaaaggtcaaggcatggcttgaagatgggaaagatgtccgcctaggagac 706
Query: 475 tggaaagctgctgatattgagatattgaatacatttcaattgcttactgccaagcctgtt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tggaaagctgctgatattgagatattgaatacatttcaattgcttactgccaagcctgtt 766
Query: 535 gtttacctggttaacatgaatgaaaaggattaccagagaaagaagaacaagttcttgccc 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gtttacctggttaacatgaatgaaaaggattaccagagaaagaagaacaagttcttgccc 826
Query: 595 aagattcatgcttgggtgcaggaacatgggggtgaaacaattattcctttcagcgctgcg 654
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 827 aagattcatgcttgggtgcaggaacat-ggggtgaaacaatta-tcctttcagcgctgcg 884
Query: 655 tttgagagaaaccttgctgacatgacaccagatgaagcagctaagtattgtgaggagaac 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 tttgagagaaaccttgctgacatgacaccagatgaagcagctaagtattgtgaggagaac 944
Query: 715 aaggtgcaaagcgcccttccaaagatcattaagactggattttctgcaattaatcttata 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 aaggtgcaaagcgcccttccaaagatcattaagactggattttctgcaattaatcttata 1004
Query: 775 tacttcttcactgctggccctgacgaggtaaagtgctggcagatcagaaggcaatcaaag 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 tacttcttcactgctggccctgacgaggtaaagtgctggcagatcagaaggcaatcaaag 1064
Query: 835 gcccctcaggctgcagggacaatccatagtgattttgagagaggttttatatgtgctgag 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 gcccctcaggctgcagggacaatccatagtgattttgagagaggttttatatgtgctgag 1124
Query: 895 gtaatgaaatttgaggatctcaaggagctgggcagtgagtcagccgttaag 945
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 gtaatgaaatttgaggatctcaaggagctgggcagtgagtcagccgttaag 1175