Jatropha Genome Database
- JcCB0016371.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0016371.10 - phase: 0 /partial
(2322 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02465 2218 0.0
KJC_c08057 831 0.0
KJC_c03054 278 6e-74
KJC_c02358 125 5e-28
KJC_c01561 90 3e-17
KJC_c00944 54 2e-06
>KJC_c02465
Length = 1157
Score = 2218 bits (1119), Expect = 0.0
Identities = 1154/1159 (99%), Gaps = 5/1159 (0%)
Strand = Plus / Minus
Query: 194 aaaaatcttacttatctgattggaattaccttcttgctaaccctagaattggacgtcttt 253
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1155 aaaaatcttacttatctgattggaattaccttcttgctaacc-tagaattggacgtcttt 1097
Query: 254 tctccagcaaagctccgaagaagaaaaattatgagaacttctctcccaagga-gaagaag 312
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1096 tctccagcaaagctccgaagaagaaaaattatgagaacttctctcccaaggaagaagaag 1037
Query: 313 gaagcaccaaaagggaatgggcagaaatctgaatccaaagatgacgaatggagcttcgat 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 gaagcaccaaaagggaatgggcagaaatctgaatccaaagatgacgaatggagcttcgat 977
Query: 373 aagaaattcatcaggcaatccaatttgctgaccgctttagtagtcattggggcacttcta 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 aagaaattcatcaggcaatccaatttgctgaccgctttagtagtcattggggcacttcta 917
Query: 433 ccctttgcttttggatctcatgaagagcaacagattagtttccaagaattcaaaaataag 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 ccctttgcttttggatctcatgaagagcaacagattagtttccaagaattcaaaaataag 857
Query: 493 tttcttgaaccaggtttagtcgatcatatagttgtttccaataaatcagttgcaaaagtg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 tttcttgaaccaggtttagtcgatcatatagttgtttccaataaatcagttgcaaaagtg 797
Query: 553 tatgtaaggagctcagccccgaagccaccaactgatgaacttgtgcagggtcccattaat 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tatgtaaggagctcagccccgaagccaccaactgatgaacttgtgcagggtcccattaat 737
Query: 613 ggtgcccctgctagaggacatggcggccaatacaaatgctacttcaatatcggaagtgtc 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ggtgcccctgctagaggacatggcggccaatacaaatgctacttcaatatcggaagtgtc 677
Query: 673 gaatcttttgaggataagttggaggaagcccaagaagcattagggatagaccctcatgac 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaatcttttgaggataagttggaggaagcccaagaagcattagggatagaccctcatgac 617
Query: 733 tatgttcccgttacatatgtctctgaaatagcttggttccaagaatggatgaagtttgca 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tatgttcccgttacatatgtctctgaaatagcttggttccaagaatggatgaagtttgca 557
Query: 793 ccaatactcttacttttgggaagcctgtacatgggacgtaggatgcaaggtggattaggc 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ccaatactcttacttttgggaagcctgtacatgggacgtaggatgcaaggtggattaggc 497
Query: 853 gttggcagtggtggcggaggcgatggaaagaatatccgtggaatattcaacatagggaag 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gttggcagtggtggcggaggcgatggaaagaatatccgtggaatattcaacatagggaag 437
Query: 913 gctcatgtgaccaaagtggataaaaatgctaagaataaggtatatttcaaagatgttgct 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gctcatgtgaccaaagtggataaaaatgctaagaataaggtatatttcaaagatgttgct 377
Query: 973 ggctgtgatgaggcgaagcaggaaatcatggagtttgtacacttcctcaagaacccaaag 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ggctgtgatgaggcgaagcaggaaatcatggagtttgtacacttcctcaagaacccaaag 317
Query: 1033 aagtatgaggaactgggagctaaaattccgaaaggtgctcttttggttggtcctccagga 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aagtatgaggaactgggagctaaaattccgaaaggtgctcttttggttggtcctccagga 257
Query: 1093 actggaaagacccttctagcaaaggcaactgcaggggaatctggagtgccttttctgtcc 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 actggaaagacccttctagcaaaggcaactgcaggggaatctggagtgccttttctgtcc 197
Query: 1153 atttctggttcagatttcatggagatgtttgttggtgttggaccgtccagagtgagaaac 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 atttctggttcagatttcatggagatgtttgttggtgttggaccgtccagagtgagaaac 137
Query: 1213 ttgtttcaacaagctaggcagtgtgctcctagtattgtatttattgatgagattgatgcg 1272
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 -tgtttcaacaagctaggcagtgtgctcctagtattgtatttattgatgagattgatgcg 78
Query: 1273 attggcagagcgagggggcgtgggggcttctcaggtggcaatgatgagcgagaaagtact 1332
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 77 attggcagagcga-ggggcgtgggggcttctcaggtggcaatgatgagcgag-aagtact 20
Query: 1333 cttaatcagttactggtcg 1351
|||||||||||||||||||
Sbjct: 19 cttaatcagttactggtcg 1
>KJC_c08057
Length = 440
Score = 831 bits (419), Expect = 0.0
Identities = 433/435 (99%), Gaps = 2/435 (0%)
Strand = Plus / Plus
Query: 1523 taaaacttgatcatgagccatcatattattcgcaaaggctcgcagccctcactcctggat 1582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 taaaacttgatcatgagccatcatattattcgcaaaggctcgcagccctcactcctggat 65
Query: 1583 ttgctggggcagatatt-gcaaatgtttgtaatgaagctgcactagtagctgctaggtgt 1641
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ttgctggggcagatattagcaaatgtttgtaatgaagctgcactagtagctgctaggtgt 125
Query: 1642 gaaggttcacaggtgacaatggacaattttgaggcagcaatagatagaataattggtggt 1701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gaaggttcacaggtgacaatggacaattttgaggcagcaatagatagaataattggtggt 185
Query: 1702 ttggagaagaagaacaaggtaataagcaagcaggagcgccgaactgttgcttatcatgaa 1761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttggagaagaagaacaaggtaataagcaagcaggagcgccgaactgttgcttatcatgaa 245
Query: 1762 tcaggtcatgctgttactggctggttcttggaacacgcagaacctcttctaaaagtgaca 1821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tcaggtcatgctgttactggctggttcttggaacacgcagaacctcttctaaaagtgaca 305
Query: 1822 attgttccgcgtggtactgctgcccttggatttgcacagtatgttcctaatgaaaacctt 1881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 attgttccgcgtggtactgctgcccttggatttgcacagtatgttcctaatgaaaacctt 365
Query: 1882 ctcttgactaaggagcagctttttgatatgacatgcatgacccttgga-ggtagagcagc 1940
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 366 ctcttgactaaggagcagctttttgatatgacatgcatgacccttggacggtagagcagc 425
Query: 1941 tgaacaggtattgtt 1955
|||||||||||||||
Sbjct: 426 tgaacaggtattgtt 440
>KJC_c03054
Length = 603
Score = 278 bits (140), Expect = 6e-74
Identities = 459/565 (81%), Gaps = 2/565 (0%)
Strand = Plus / Plus
Query: 1241 ctagtattgtatttattgatgagattgatgcgattggcagagcgagggggcgtgggggct 1300
||||||||||||| |||||||| || ||||| ||||| |||||||||||||||| ||||
Sbjct: 4 ctagtattgtattcattgatgaaatagatgcaattggtcgagcgagggggcgtggaggct 63
Query: 1301 tctcaggtggcaatgatgagcgagaaagtactcttaatcagttactggtcgaaatggatg 1360
| |||||||||||||||||||| |||||||| ||||| || || || || ||||||||||
Sbjct: 64 tttcaggtggcaatgatgagcgtgaaagtacccttaaccaattgcttgtagaaatggatg 123
Query: 1361 gctttggaactacttctggagttgttgtgcttgctggcactaataggccagacattttag 1420
| ||||| || || || ||||| ||||| ||||||||||| || ||||| || || || |
Sbjct: 124 gatttgggaccacctcaggagtagttgtacttgctggcacaaacaggcctgatatcttgg 183
Query: 1421 acaaagctttgttgagaccaggccgatttgatcgtcaaatatccattgataagccagata 1480
|||||||| |||||||||| || || |||||||||||||| | || ||||| || || |
Sbjct: 184 acaaagctctgttgagacctggtcggtttgatcgtcaaattacgatcgataaacctgaca 243
Query: 1481 ttaaaggccgtgaacagatatttaatatctacctgnnnnnnntaaaacttgatcatgagc 1540
| ||||||||| | ||||| || | || || ||| | ||||||||| |||| |
Sbjct: 244 tcaaaggccgtaatcagattttccagatatatctgaaaaagct-aaacttgataatgatc 302
Query: 1541 catcatattattcgcaaaggctcgcagccctcactcctggatttgctggggcagatattg 1600
|||| | ||| || || | || || || || |||||||||||||||||||| || ||||
Sbjct: 303 catctttttactctcagcgacttgctgctcttactcctggatttgctggggctgacattg 362
Query: 1601 caaatgtttgtaatgaagctgcactagtagctgctaggtgtgaaggttcacaggtgacaa 1660
|||||||||| ||||||||||| || | ||||| ||| ||| || |||| |||||||
Sbjct: 363 caaatgtttgcaatgaagctgctttaattgctgcaaggaatgagagtacacaagtgacaa 422
Query: 1661 tggacaattttgaggcagcaatagatagaataattggtggtttggagaagaagaacaagg 1720
|||| |||||||||||||| ||||| || | || ||||| ||||| |||||||| ||||
Sbjct: 423 tggaaaattttgaggcagctatagacagggttatcggtggcttggaaaagaagaataagg 482
Query: 1721 taataagcaagcaggagcgccgaactgttgcttatcatgaatcaggtcatgctgttactg 1780
| || ||||||| || | | |||| ||||||||||||||| ||||||||||||||||
Sbjct: 483 ttatcagcaagcttgaaaggaggactg-tgcttatcatgaatctggtcatgctgttactg 541
Query: 1781 gctggttcttggaacacgcagaacc 1805
|||||||| ||||||| ||||||||
Sbjct: 542 gctggttcctggaacatgcagaacc 566
>KJC_c02358
Length = 973
Score = 125 bits (63), Expect = 5e-28
Identities = 153/183 (83%)
Strand = Plus / Plus
Query: 888 ccgtggaatattcaacatagggaaggctcatgtgaccaaagtggataaaaatgctaagaa 947
|||||||||||| ||||| || ||||| ||| | || ||| ||||||| || || || |
Sbjct: 790 ccgtggaatatttaacatgggaaaggcacatttcacaaaaatggataagaacgccaaaga 849
Query: 948 taaggtatatttcaaagatgttgctggctgtgatgaggcgaagcaggaaatcatggagtt 1007
|||||||| || || ||||| ||||| ||||||||||| ||||| || || ||||||||
Sbjct: 850 taaggtattctttaaggatgtagctggatgtgatgaggcaaagcaagagattatggagtt 909
Query: 1008 tgtacacttcctcaagaacccaaagaagtatgaggaactgggagctaaaattccgaaagg 1067
||| |||||||||||||| |||||||| || ||||| |||||||||||||||| |||||
Sbjct: 910 tgtgcacttcctcaagaatccaaagaaatacgaggagttgggagctaaaattccaaaagg 969
Query: 1068 tgc 1070
|||
Sbjct: 970 tgc 972
Score = 101 bits (51), Expect = 7e-21
Identities = 90/103 (87%)
Strand = Plus / Plus
Query: 638 gccaatacaaatgctacttcaatatcggaagtgtcgaatcttttgaggataagttggagg 697
|||| ||||||| |||||||||||| |||||||| ||| |||||||||| ||| ||||||
Sbjct: 546 gccactacaaatactacttcaatattggaagtgttgaaacttttgaggaaaagctggagg 605
Query: 698 aagcccaagaagcattagggatagaccctcatgactatgttcc 740
| || ||||||||||| |||||||| || ||||| ||||||||
Sbjct: 606 aggcacaagaagcattggggatagatccgcatgattatgttcc 648
Score = 83.8 bits (42), Expect = 2e-15
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 461 aacagattagtttccaagaattcaaaaataagtttcttgaaccaggtttagtcgatcata 520
||||||||||||||||||| ||||||| ||| | |||||||| || || || ||||| |
Sbjct: 363 aacagattagtttccaagagttcaaaaccaagctacttgaacctggcttggtggatcaca 422
Query: 521 tagttgtttccaataaatcagttgcaaaagtgtatgtaagga 562
| ||||| || |||||||||||||| || |||||||||||||
Sbjct: 423 ttgttgtctctaataaatcagttgccaaggtgtatgtaagga 464
>KJC_c01561
Length = 1443
Score = 89.7 bits (45), Expect = 3e-17
Identities = 114/137 (83%)
Strand = Plus / Minus
Query: 1057 attccgaaaggtgctcttttggttggtcctccaggaactggaaagacccttctagcaaag 1116
||||| ||||||| |||| | |||||||||||||||||||| |||||||||||||| |||
Sbjct: 616 attccaaaaggtgttcttcttgttggtcctccaggaactgggaagacccttctagccaag 557
Query: 1117 gcaactgcaggggaatctggagtgccttttctgtccatttctggttcagatttcatggag 1176
|| | ||| || ||| |||| || || ||| | ||||| || ||||| || || | |||
Sbjct: 556 gccattgctggtgaagctggtgttccatttttctccatatcaggttctgagtttgttgag 497
Query: 1177 atgtttgttggtgttgg 1193
|||||||||||||||||
Sbjct: 496 atgtttgttggtgttgg 480
>KJC_c00944
Length = 2065
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1237 gctcctagtattgtatttattgatgagattgatgc 1271
|||||| | ||||||||||||||||||||||||||
Sbjct: 1162 gctccttgcattgtatttattgatgagattgatgc 1128