Jatropha Genome Database
- JcCB0014891.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0014891.10 - phase: 0 /partial
(819 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09526 924 0.0
KJC_c06841 737 0.0
>KJC_c09526
Length = 517
Score = 924 bits (466), Expect = 0.0
Identities = 473/474 (99%), Gaps = 1/474 (0%)
Strand = Plus / Minus
Query: 1 atggctgtggagctcatgatgtcttatagaaacgaaaattttatatctaagatggaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 atggctgtggagctcatgatgtcttatagaaacgaaaattttatatctaagatggaagaa 415
Query: 61 agcgtagttcaagaagccgcttcaggtctggagagtgtcaacaaactaatcagattgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 agcgtagttcaagaagccgcttcaggtctggagagtgtcaacaaactaatcagattgctt 355
Query: 121 tcgcagaaaaatcaagaaaaagatcagccatcttcttcttctcctccttcatcaagatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tcgcagaaaaatcaagaaaaagatcagccatcttcttcttctcctccttcatcaagatcg 295
Query: 181 tccatggataatatggacatggattgcaaagcagtagcagacgtcgccgtttccaaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tccatggataatatggacatggattgcaaagcagtagcagacgtcgccgtttccaaattt 235
Query: 241 aaaaaagtgatttctcttcttggtcgaacaagaactggccatgctcgttttagacgagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 aaaaaagtgatttctcttcttggtcgaacaagaactggccatgctcgttttagacgagct 175
Query: 301 cctgtttcaaatcctttaaataatagtaatactaataattataacaatcaagttacccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 cctgtttcaaatcctttaaataatagtaatactaataattataacaatcaagttacccaa 115
Query: 361 gaaaataatcaaatccttgaaagtaaggtttattatgctacgccgatccagcagattcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gaaaataatcaaatccttgaaagtaaggtttattatgctacgccgatccagcagattcct 55
Query: 421 cctctt-ccgccgcctccgcctcctcaatatttttcttcggtggtgattccaaa 473
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 cctcttcccgccgcctccgcctcctcaatatttttcttcggtggtgattccaaa 1
>KJC_c06841
Length = 609
Score = 737 bits (372), Expect = 0.0
Identities = 383/386 (99%), Gaps = 3/386 (0%)
Strand = Plus / Plus
Query: 437 cgcctcctcaatatttttcttcggtggtgattccaaatgataatagtaataataatggag 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcctcctcaatatttttcttcggtggtgattccaaatgataatagtaataataatggag 60
Query: 497 tgatcagtgagaggaaagaatcgtctaccaccattaatttttcttattcttcggctgcta 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgatcagtgagaggaaagaatcgtctaccaccattaatttttcttattcttcggctgcta 120
Query: 557 actctttcctgtcgtccttaaccggcgacaccactgacagtaagcagctatcttcttcat 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actctttcctgtcgtccttaaccggcgacaccactgacagtaagcagctatcttcttcat 180
Query: 617 cggcgttccagatcgccggtgggaagcctcctatctcttcttctttgaagaggaagtgca 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggcgttccagatcgccggtgggaagcctcctatctcttcttctttgaagaggaagtgca 240
Query: 677 gctctgaaactttgggttccggcaagtgcggttcctcttccggtcggtgccattgctcca 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctctgaaactttgggttccggcaagtgcggttcctcttccggtcggtgccattgctcca 300
Query: 737 agaag---agaaaattgagattaaagagagtggtgagggttcctgctattagcttgaaat 793
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaagagcagaaaattgagattaaagagagtggtgagggttcctgctattagcttgaaat 360
Query: 794 tggctgatattccaccagatgattat 819
||||||||||||||||||||||||||
Sbjct: 361 tggctgatattccaccagatgattat 386