Jatropha Genome Database

JcCB0013521.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0013521.10 - phase: 0 
         (498 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05434                                                            983   0.0  

>KJC_c05434 
          Length = 525

 Score =  983 bits (496), Expect = 0.0
 Identities = 496/496 (100%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggcatcccaaaccctaacagatccaacatcgtcctctatggatccgatattccacatcgt 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggcatcccaaaccctaacagatccaacatcgtcctctatggatccgatattccacatcgt 60

                                                                       
Query: 63  taaaatcgttccctactccattcttcgccctcctcgccttcgcttgaagctcccatcact 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taaaatcgttccctactccattcttcgccctcctcgccttcgcttgaagctcccatcact 120

                                                                       
Query: 123 tactttaccgtcgccaatgaccgtctttgcccttgtcctcctcacctactttatggtcgt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tactttaccgtcgccaatgaccgtctttgcccttgtcctcctcacctactttatggtcgt 180

                                                                       
Query: 183 ctccgggatcgtctacgacgtaattgtggagccgcctggaatcggatcgactcaagatcc 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctccgggatcgtctacgacgtaattgtggagccgcctggaatcggatcgactcaagatcc 240

                                                                       
Query: 243 ggcaaccggatctatccgacctgtcgtgtttctacctggtcgcgtgaacgggcaatacat 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcaaccggatctatccgacctgtcgtgtttctacctggtcgcgtgaacgggcaatacat 300

                                                                       
Query: 303 aattgagggcttgtcatctggatttatgttcgtgcttggtggaactggaattgtgctaat 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aattgagggcttgtcatctggatttatgttcgtgcttggtggaactggaattgtgctaat 360

                                                                       
Query: 363 ggatcttgcattggacaagaatcgagctaagagcgtaaaggtttcttatgcgactgctgg 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggatcttgcattggacaagaatcgagctaagagcgtaaaggtttcttatgcgactgctgg 420

                                                                       
Query: 423 tatttcgtcgttgattatcgcatatgtgatgagtatgctctttattcgcattaagattcc 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatttcgtcgttgattatcgcatatgtgatgagtatgctctttattcgcattaagattcc 480

                           
Query: 483 tggttatcttaggtga 498
           ||||||||||||||||
Sbjct: 481 tggttatcttaggtga 496