Jatropha Genome Database

JcCB0010741.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0010741.20 + phase: 0 
         (1203 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09260                                                            123   1e-27

>KJC_c09260 
          Length = 389

 Score =  123 bits (62), Expect = 1e-27
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                        
Query: 895  gatgtgtacagctttggcatatgcttatgggaaatttattgctgtgatatgccttatcct 954
            ||||| |||||||||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 376  gatgtctacagctttggcatatgcttgtgggaaatttattgttgtgatatgccatatcct 317

                                                          
Query: 955  gatcttagtttcgctgaagtttcatctcaggttgttcgacagaatt 1000
            |||||||| || ||||| || ||||||   ||||||||||||||||
Sbjct: 316  gatcttagctttgctgatgtgtcatctgctgttgttcgacagaatt 271