Jatropha Genome Database
- JcCB0010451.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0010451.20 + phase: 0
(1506 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06584 1199 0.0
>KJC_c06584
Length = 635
Score = 1199 bits (605), Expect = 0.0
Identities = 633/637 (99%), Gaps = 4/637 (0%)
Strand = Plus / Plus
Query: 65 cggctataaaatctaattcctcctttaaactcttccaatcgtcaaagcaaagaccttcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggctataaaatctaattcctcctttaaactcttccaatcgtcaaagcaaagaccttcta 60
Query: 125 atagtcttttccactcactgaattcaggttttcgatcttcgaactctagaatttttgttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atagtcttttccactcactgaattcaggttttcgatcttcgaactctagaatttttgttt 120
Query: 185 ccaattcggtaactaaccctgaaactgagttcttaagctctgtaagtcccgtttatgcac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccaattcggtaactaaccctgaaactgagttcttaagctctgtaagtcccgtttatgcac 180
Query: 245 ctacgccgcctaaccgcgagcttcgtactcctcatagcgggtatcattttgatggaacga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctacgccgcctaaccgcgagcttcgtactcctcatagcgggtatcattttgatggaacga 240
Query: 305 caaggcaattctttgagggttggtatttcaaggtttctattcctgagcggaagcagagct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaggcaattctttgagggttggtatttcaaggtttctattcctgagcggaagcagagct 300
Query: 365 tttgttttatgtattctttggagaatccggcattccggaaaaagttgacgccttttgaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttgttttatgtattctttggagaatccggcattccggaaaaagttgacgccttttgaag 360
Query: 425 ttgcacaacatggacctaggtcaactggagtcggggctcaaattcttggggcttatgaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgcacaacatggacctaggtcaactggagtcggggctcaaattcttggggcttatgaca 420
Query: 485 agtatatatgtcaacacgttgaagaatctcaaaatttctggggaaataggcatgaactgg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agtatatatgtcaacacgttgaagaatctcaaaatttctggggaaataggcatgaactgg 480
Query: 545 tattggggaatacttttgtagctgagaaaggcatgcagcctccaactaaggaagttcctc 604
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tattggggaatacttttg-agctgagaaaggcatgcagcctccaactaaggaagttcctc 539
Query: 605 ctcaggactttagcagaagagtttcagaaggtttccaagt-caccccactttggcatcaa 663
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 540 ctcaggactttagcagaagagtttcagaaggtttccaagtccacccca-tttggcatcaa 598
Query: 664 ggtttcattcgcgatgatggcaggtcag-attatgtg 699
|||||||||||||||||||||||||||| ||||||||
Sbjct: 599 ggtttcattcgcgatgatggcaggtcagtattatgtg 635