Jatropha Genome Database
- JcCB0010441.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0010441.20 - phase: 0
(1218 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00742 2284 0.0
KJC_c02486 375 e-103
KJC_c07817 232 2e-60
KJC_s19228 123 1e-27
KJC_c06407 74 9e-13
KJC_c00343 56 2e-07
>KJC_c00742
Length = 1736
Score = 2284 bits (1152), Expect = 0.0
Identities = 1161/1164 (99%)
Strand = Plus / Minus
Query: 55 gcagtgaaaccaggagacaccatttttgttggtcagtacctatttactggaagtgaaact 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1186 gcagtgaaaccaggagacaccatttttgttggtcagtacctatttactggaagtgaaact 1127
Query: 115 acgtctgtgtggctggaggtttctgaggtgaagggtgatgatgtggtttgcgtaataaag 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1126 acgtctgtgtggctggaggtttctgaggtgaagggtgatgatgtggtttgcgtaataaag 1067
Query: 175 aactctgccactttggcagggtcattgttcactctacatgcctctcaaattcgcattggc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 aactctgccactttggcagggtcattgttcactctacatgcctctcaaattcgcattggc 1007
Query: 235 atgcctactctttctgataaagacaaggaggttataagtacttggggagttcaaaacaaa 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 atgcctactctttctgataaagacaaggaggttataagtacttggggagttcaaaacaaa 947
Query: 295 attgactttctctcactctcttacacccgacatgcagaagatgttcgtgaggctcgtgag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 attgactttctctcactctcttacacccgacatgcagaagatgttcgtgaggctcgtgag 887
Query: 355 tacctctctaagcttggtgaccttggccagacacaaatttttgctaagattgaaaatgtg 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 tacctctctaagcttggtgaccttggccagacacaaatttttgctaagattgaaaatgtg 827
Query: 415 gagggattaacccattttgatgagatcttgcaagaagctgatgggatcatcctttcccgt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gagggattaacccattttgatgagatcttgcaagaagctgatgggatcatcctttcccgt 767
Query: 475 gggaatttgggcatagatctcccacctgagaaggtgttcttattccagaaagctgccctt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gggaatttgggcatagatctcccacctgagaaggtgttcttattccagaaagctgccctt 707
Query: 535 tacaagtgtaacatggctgggaagcctgcagtggttactcgagttgtggacagtatgact 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tacaagtgtaacatggctgggaagcctgcagtggttactcgagttgtggacagtatgact 647
Query: 595 gacaacctgagaccaactcgtgcagaagcaactgatgttgccaatgctgtgttggatgga 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gacaacctgagaccaactcgtgcagaagcaactgatgttgccaatgctgtgttggatgga 587
Query: 655 agtgatgcaattcttcttggtgctgagactcttcggggactatatcctgttgaaaccatt 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 agtgatgcaattcttcttggtgctgagactcttcggggactatatcctgttgaaaccatt 527
Query: 715 tctactgttggcaaaatttgtgctgaggcagaaaaagtttttaatcaagacttgtatttc 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tctactgttggcaaaatttgtgctgaggcagaaaaagtttttaatcaagacttgtatttc 467
Query: 775 aagaaaacggtcaaatatgttggagaaccaatgacccacttggaatctattgcttcctct 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aagaaaacggtcaaatatgttggagaaccaatgacccacttggaatctattgcttcctct 407
Query: 835 gcggtacgagcagctattaaggtgaaggcatctgtcattatttgcttcacttcatcagga 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gcggtacgagcagctattaaggtgaaggcatctgtcattatttgcttcacttcatcagga 347
Query: 895 agggctgccagattgattgccaaatataggcccacaatgccagttctgtctgttgtcatc 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agggctgccagattgattgccaaatataggcccacaatgccagttctgtctgttgtcatc 287
Query: 955 ccccggcttaagacaaatcaactgagatggagcttcagtggggcctttgaagcaaggcaa 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ccccggcttaagacaaatcaactgagatggagcttcagtggggcctttgaagcaaggcaa 227
Query: 1015 tcactcattgtcagaggtctcttccctatgcttgctgatccacgacatcctgcggaatct 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tcactcattgtcagaggtctcttccctatgcttgctgatccacgacatcctgcggaatct 167
Query: 1075 acgagtgcaacaaatgaatctgtcctgaaggttgctcttgatcatggaaaggcctcagga 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 acgagtgcaacaaatgaatctgtcctgaaggttgctcttgatcatggaaaggcctcagga 107
Query: 1135 gttattaagtctcatgacagggtagttgtttgccagaaagttggagatgcatctgtggtt 1194
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gttattaaggcgaatgacagggtagttgtttgccagaaagttggagatgcatctgtggtt 47
Query: 1195 aaaattattgagcttgaagattaa 1218
||||||||||||||||||||||||
Sbjct: 46 aaaattattgagcttgaagattaa 23
>KJC_c02486
Length = 1239
Score = 375 bits (189), Expect = e-103
Identities = 529/641 (82%), Gaps = 1/641 (0%)
Strand = Plus / Minus
Query: 78 ttttgttggtcagtacctatttactggaagtgaaactacgtctgtgtggctggaggtttc 137
|||| |||||||||| || || || |||||||||||||| ||||||||||| ||||| |
Sbjct: 740 ttttattggtcagtatctgttcacaggaagtgaaactacttctgtgtggctagaggtcac 681
Query: 138 tgaggtgaagggtgatgatgtggtttgcgtaataaagaactctgccactttggcagggtc 197
||| || || || || |||||||||||| | ||||| || ||||| || |||| ||| |
Sbjct: 680 tgaagtaaatggcgaagatgtggtttgcctgataaaaaattctgctaccttgggaggtcc 621
Query: 198 attgttcactctacatgcctctcaaattcgcattggcatgcctactctttctgataaaga 257
| | | ||||| |||| ||||||||||||||| |||| ||||| | ||||||||
Sbjct: 620 actctatactctgcatgtctctcaaattcgcatcaatctgcccactctcacggataaaga 561
Query: 258 caaggaggttataagtacttggggagttcaaaacaaaattgactttctctcactctctta 317
|||||||||||||| | ||||| |||| ||||| || ||| | |||||| | || ||
Sbjct: 560 taaggaggttataagctcatggggtgttcggaacaatatagacatcctctcattgtcata 501
Query: 318 cacccgacatgcagaagatgttcgtgaggctcgtgagtacctctctaagcttggtgacct 377
||| | ||||| |||||||| || | || || || | || || || || || |||||
Sbjct: 500 taccaggcatgctgaagatgtccgccatgcccgggaatttctttccaaactaggggacct 441
Query: 378 tggccagacacaaatttttgctaagattgaaaatgtggagggattaacccattttgatga 437
|| || ||||| ||||| |||||||||||| | ||||||||||| |||||||||||
Sbjct: 440 ccatcaaactcaaatatttgcgaagattgaaaatatagagggattaactcattttgatga 381
Query: 438 gatcttgcaagaagctgatgggatcatcctttcccgtgggaatttgggcatagatctccc 497
|||| |||||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 380 gatcctgcaagaagcagatggcatcatcctttctcgtggaaatttgggcatagatctccc 321
Query: 498 acctgagaaggtgttcttattccagaaagctgccctttacaagtgtaacatggctgggaa 557
||| ||||||||||| |||| || |||||||| |||||||||| ||||||||||| ||
Sbjct: 320 accagagaaggtgtttctatttcaaaaagctgctgtttacaagtgcaacatggctggaaa 261
Query: 558 gcctgcagtggttactcgagttgtggacagtatgactgacaacctgagaccaactcgtgc 617
|||||| ||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||
Sbjct: 260 gcctgctgtggttactcgtgttgtggacagtatgacagacaatttgagacctactcgtgc 201
Query: 618 agaagcaactgatgttgccaatgctgtgttggatggaagtgatgcaattcttcttggtgc 677
|||||||||||||||||||||||| || |||||||| ||||||||||||||||| |||||
Sbjct: 200 agaagcaactgatgttgccaatgcagtattggatggtagtgatgcaattcttctaggtgc 141
Query: 678 tgagactcttcggggactatatcctgttgaaaccatttcta 718
||||| ||| |||||| || |||||||| ||||||||||
Sbjct: 140 agagac-cttgcgggactgtaccctgttgagaccatttcta 101
>KJC_c07817
Length = 427
Score = 232 bits (117), Expect = 2e-60
Identities = 348/425 (81%)
Strand = Plus / Plus
Query: 703 gttgaaaccatttctactgttggcaaaatttgtgctgaggcagaaaaagtttttaatcaa 762
||||| |||||||||| ||||| | ||| |||||||||||||| |||||||| ||||||
Sbjct: 1 gttgagaccatttctatcgttggaagaatatgtgctgaggcagagaaagttttcaatcaa 60
Query: 763 gacttgtatttcaagaaaacggtcaaatatgttggagaaccaatgacccacttggaatct 822
|| |||||||||| || | |||||||||||| |||||||||||||| || |||||
Sbjct: 61 gatctgtatttcaaaaaggctaccaaatatgttggggaaccaatgacccatttagaatca 120
Query: 823 attgcttcctctgcggtacgagcagctattaaggtgaaggcatctgtcattatttgcttc 882
||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||| ||||||
Sbjct: 121 attgcttcctcagcggtacgtgcagctatcaaggtgaaggcttctgttattatctgcttc 180
Query: 883 acttcatcaggaagggctgccagattgattgccaaatataggcccacaatgccagttctg 942
|||||| | |||| ||||| || ||||| | || || |||| |||||||| || |
Sbjct: 181 acttcaacgggaaaagctgctaggttgatatcaaagtaccggccaacaatgcctgtgata 240
Query: 943 tctgttgtcatcccccggcttaagacaaatcaactgagatggagcttcagtggggccttt 1002
|||||||| ||||| || |||||||||||||||||| | |||| ||| | || || |||
Sbjct: 241 tctgttgttatccctcgacttaagacaaatcaactgcgctggacctttacaggtgctttt 300
Query: 1003 gaagcaaggcaatcactcattgtcagaggtctcttccctatgcttgctgatccacgacat 1062
|| |||||||| |||||||||||||| || || || || || ||||| || |||| |||
Sbjct: 301 gaggcaaggcagtcactcattgtcagtggactttttcccatccttgcagacccacagcat 360
Query: 1063 cctgcggaatctacgagtgcaacaaatgaatctgtcctgaaggttgctcttgatcatgga 1122
| || ||||| |||| ||||||||||||||| || |||||||||||| | ||||| ||
Sbjct: 361 gcggctgaatccacgaatgcaacaaatgaatcagttctgaaggttgctttagatcacggc 420
Query: 1123 aaggc 1127
|||||
Sbjct: 421 aaggc 425
>KJC_s19228
Length = 331
Score = 123 bits (62), Expect = 1e-27
Identities = 129/150 (86%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 740 aggcagaaaaagtttttaatcaagacttgtatttcaagaaaacggtcaaatatgttggag 799
||||||| |||||||| |||||||| |||||||||| || | |||||||||||| |
Sbjct: 118 aggcagagaaagttttcaatcaagatctgtatttcaaaaaggctaccaaatatgttgggg 177
Query: 800 aaccaatgacccacttggaatctattgcttcctctgcggtacgagcagctattaa-ggtg 858
||||||||||||| || ||||| ||||||||||| |||||||| |||||||| || ||||
Sbjct: 178 aaccaatgacccatttagaatcaattgcttcctcagcggtacgtgcagctatcaagggtg 237
Query: 859 aaggcatctgtcattatttgcttcacttca 888
||||| ||||| ||||| ||||||||||||
Sbjct: 238 aaggcttctgttattatctgcttcacttca 267
>KJC_c06407
Length = 793
Score = 73.8 bits (37), Expect = 9e-13
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 604 agaccaactcgtgcagaagcaactgatgttgccaatgctgtgttggatggaagtgatgca 663
||||||||||| |||||||||||||||||||| |||||||| | ||||| |||||
Sbjct: 180 agaccaactcgcgcagaagcaactgatgttgctaatgctgttcttgatggtgctgatggt 121
Query: 664 attcttcttggtgctgagactcttcggggactatatcctgt 704
|| | || || |||||||| ||||||||||||||||||||
Sbjct: 120 atattactgggcgctgagacgcttcggggactatatcctgt 80
>KJC_c00343
Length = 2044
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 605 gaccaactcgtgcagaagcaactgatgttgccaatgctgt 644
||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 851 gaccaacccgtgctgaagcaactgatgttgctaatgctgt 812