Jatropha Genome Database
- JcCB0009671.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0009671.20 - phase: 0
(1101 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c07578 523 e-148
KJC_c08650 345 1e-94
>KJC_c07578
Length = 579
Score = 523 bits (264), Expect = e-148
Identities = 448/508 (88%), Gaps = 1/508 (0%)
Strand = Plus / Plus
Query: 71 cacccctcctccgctgcaacttcgctcttccgaccatcgccactactgaacccgaacccg 130
|||||||| |||||||||||||| |||| || |||||| |||| ||||||||||||||||
Sbjct: 70 cacccctcttccgctgcaacttctctctccctaccatcaccaccactgaacccgaacccg 129
Query: 131 tctacacatccgtcaggtccttcgcccctgccacagttgccaatcttggtcccggattcg 190
||||||| ||||||||||| || ||||| ||||| |||||||| || || ||||||||||
Sbjct: 130 tctacacctccgtcaggtcgtttgcccccgccactgttgccaacctcggccccggattcg 189
Query: 191 acttcttgggttgcgctgtcgatggtctaggagactttgtcgccgttcgaattgatccct 250
||||||||||||| |||||||||||||| |||||||||||| |||||||||| || || |
Sbjct: 190 acttcttgggttgtgctgtcgatggtcttggagactttgtctccgttcgaatcgacccat 249
Query: 251 ccgttcatcccggcgagatttctatctctgacattaccggaacccacgccagtaaaaaac 310
|||| |||||||| ||||| || |||||||||||||| |||| || ||| ||||||| |
Sbjct: 250 ccgtccatcccggtgagatctccatctctgacattactggaaatcatgcctgtaaaaagc 309
Query: 311 tctcaaagaaccctctatggaactgcgcaactatcgctgctattgctgccatgaaaatgc 370
| |||||| | ||||| ||||||||||| |||| ||||||||||| ||||||||||||
Sbjct: 310 tttcaaaggatcctctccggaactgcgcaggtatctctgctattgctaccatgaaaatgc 369
Query: 371 ttaatatccgctcggtgggtctttctcttacacttgaaaagggccttcctttagggagcg 430
||||||| ||||| |||||||||||||||||||||||||| || ||||| |||||||| |
Sbjct: 370 ttaatatacgctctgtgggtctttctcttacacttgaaaa-ggacttccgttagggagtg 428
Query: 431 gccttggatcgagtgctgccagtgctgcggctgctgttgtggcggtcaatgagatttttg 490
| |||||||||||||| |||||||||||||| |||| ||| || || ||||||||||| |
Sbjct: 429 gtcttggatcgagtgcagccagtgctgcggcagctgctgttgctgtaaatgagattttcg 488
Query: 491 gtggaaaattacaagttaaggatcttgttcgtgctgggttggaatctgaagctaaagttt 550
| ||||||||| ||||||||||| | ||| |||||| ||||||||||||||||||||||
Sbjct: 489 ggggaaaattagaagttaaggatttaattcttgctggattggaatctgaagctaaagttt 548
Query: 551 caggttatcatgcagataatatagcgcc 578
||||||||||||||||||||||||||||
Sbjct: 549 caggttatcatgcagataatatagcgcc 576
>KJC_c08650
Length = 321
Score = 345 bits (174), Expect = 1e-94
Identities = 258/286 (90%)
Strand = Plus / Minus
Query: 721 ttgccggcagaagtcgggatacctcatcacgtctggaactgcagccaagctggggcgtta 780
||||||| |||| | ||||| || || || ||||||||||| |||||||||||||| |||
Sbjct: 305 ttgccggaagaaattgggatgccccaccatgtctggaactgtagccaagctggggcatta 246
Query: 781 gttgcttctgtgctgcaaggagatttggtggggttgggcaaggcactctcaaatgataaa 840
|||||||||||||| ||||| |||||| |||||||||| |||||||| |||||||||||
Sbjct: 245 gttgcttctgtgctacaaggggatttgatggggttgggtaaggcactttcaaatgataag 186
Query: 841 attgtggagcctaaaagggcacccttgattcctggaatggaagaagtgaagaaggcggcc 900
|||||||||||||||||||| || |||||||| |||||||| |||||||||||||||||
Sbjct: 185 attgtggagcctaaaagggctccattgattcccggaatggaggaagtgaagaaggcggct 126
Query: 901 attagtgccggagcatttgggtgtacaattagtggagcagggcctacagctgtggcggtg 960
||||| || || |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 125 attagggcaggcgcatttgggtgtacaattagtggagcagggcctacagctgtggccgtg 66
Query: 961 attgatgatgaggaaagaggaaaggagattggagagaagatggtgg 1006
|||||| ||||||| ||||||||||||||||| |||| ||||||||
Sbjct: 65 attgataatgaggagagaggaaaggagattggggagaggatggtgg 20