Jatropha Genome Database

JcCB0009671.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0009671.10 + phase: 0 /pseudo/partial
         (348 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06063                                                            143   3e-34

>KJC_c06063 
          Length = 705

 Score =  143 bits (72), Expect = 3e-34
 Identities = 79/80 (98%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                       
Query: 62  tttcatatgaggagttgcttgcattgggtgaagttgttggaactgagagtagggggc-tt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1   tttcatatgaggagttgcttgcattgggtgaagttgttggaactgagagtagggggcgtt 60

                               
Query: 121 tcagctgatacaattgcctc 140
           ||||||||||||||||||||
Sbjct: 61  tcagctgatacaattgcctc 80