Jatropha Genome Database
- JcCB0008641.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0008641.10 + phase: 2 /pseudo/partial
(739 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09505 765 0.0
KJC_c08192 555 e-158
>KJC_c09505
Length = 443
Score = 765 bits (386), Expect = 0.0
Identities = 417/422 (98%), Gaps = 4/422 (0%)
Strand = Plus / Minus
Query: 305 gagcctcaagaggatttctttaggggtttagtgccatttttggatccgaaaacagaaaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gagcctcaagaggatttctttaggggtttagtgccatttttggatccgaaaacagaaaga 384
Query: 365 gactttatatttgagcttaggaatgaagaagatggtgggagtgtagaaatgtgtacatat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gactttatatttgagcttaggaatgaagaagatggtgggagtgtagaaatgtgtacatat 324
Query: 425 tatgaaggattgtgtaagattgtaaaagttagtcaaaaggcttatgtagatgatgtagtg 484
|||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||
Sbjct: 323 tatgaaggattgtgtaagattgtaaa-gttagtcaaa-ggct-atgtagatgatgtagtg 267
Query: 485 aatgcatatgagaagttgagtgaggagaagaaatccaggtgtttagagttcttgcttagg 544
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 266 aatgcatatgagaagttgagtgaggaga-gaaatccaggtgtttagagttcttgcttagg 208
Query: 545 aatcatccagtgcaattgttgcatccctatactaaggagtggaaggccaagttagaggaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aatcatccagtgcaattgttgcatccctatactaaggagtggaaggccaagttagaggaa 148
Query: 605 atggagttgggctgtgatgcacctgacgatgatgaggatcggaataataatgagacagag 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atggagttgggctgtgatgcacctgacgatgatgaggatcggaataataatgagacagag 88
Query: 665 ttcactgagtgggttgaagatgatggtgatggtgatgacgatgatgttgttgtggatgca 724
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 87 ttcactgagtgggttgaagatgatggtgatggtgatgaggatgatgttgttgtggatgca 28
Query: 725 gt 726
||
Sbjct: 27 gt 26
>KJC_c08192
Length = 772
Score = 555 bits (280), Expect = e-158
Identities = 318/326 (97%), Gaps = 6/326 (1%)
Strand = Plus / Plus
Query: 1 agaagattgaacaatttgagatggaggttgattttggagagaaattgaaactattaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 451 agaagattgaacaatttgagatggaggttgattttggagagaaattgaaactatt-ggac 509
Query: 61 aaaaatgtcggccttaggcgttattgggtgtttgctaggcacccgaaatgggtaataacg 120
||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 510 aaaaatgtcggccttaggcgttattgg-tgtttgctaggcaccg--aatgggtaataacc 566
Query: 121 --aaaaccatgggagcaatggacattagttagtgaagttgttttagaagctggtaagcag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaaaaaccatgggagcaatggacattagttagtgaagttgttttagaagctggtaagcag 626
Query: 179 aggatagataaatggaatttgatgggtcgattaggtaatcaagcaagaaaactgattaca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aggatagataaatggaatttgatgggtcgattaggtaatcaagcaagaaaactgattaca 686
Query: 239 caatgtgctgcttggtttaggccagatattatctatgttaagagaccagtttatcaatgt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 caatgtgctgcttggtttaggccagatattatctatgttaagagaccagtttatcaatgt 746
Query: 299 aggtttgagcctcaagaggatttctt 324
||||||||||||||||||||||||||
Sbjct: 747 aggtttgagcctcaagaggatttctt 772