Jatropha Genome Database

JcCB0008631.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0008631.30 + phase: 0 /partial
         (591 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09582                                                            404   e-113

>KJC_c09582 
          Length = 536

 Score =  404 bits (204), Expect = e-113
 Identities = 211/212 (99%), Gaps = 1/212 (0%)
 Strand = Plus / Minus

                                                                       
Query: 380 tggttccagtttttcaattcggaatcattggactaatcatgggaggtgaacaaatctttc 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 536 tggttccagtttttcaattcggaatcattggactaatcatgggaggtgaacaa-tctttc 478

                                                                       
Query: 440 caaagttaggatttgcagttccaccttcttggtattactctctgcgtgcaaacagatttg 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 caaagttaggatttgcagttccaccttcttggtattactctctgcgtgcaaacagatttg 418

                                                                       
Query: 500 gaagtattgcaagcacttggctttttggaaactttattcagtccttcctccagagttctg 559
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaagtattgcaagcacttggctttttggaaactttattcagtccttcctccagagttctg 358

                                           
Query: 560 gtgcatttgaagtatattgcaatggtgaattg 591
           ||||||||||||||||||||||||||||||||
Sbjct: 357 gtgcatttgaagtatattgcaatggtgaattg 326