Jatropha Genome Database
- JcCB0008441.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0008441.10 - phase: 0
(1254 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09972 985 0.0
KJC_c04516 404 e-112
>KJC_c09972
Length = 663
Score = 985 bits (497), Expect = 0.0
Identities = 507/509 (99%), Gaps = 1/509 (0%)
Strand = Plus / Minus
Query: 75 agatgtttgcatcgtcggtgttgcccgtacaccaatgggtggatttcttggtacactatc 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 agatgtttgcatcgtcggtgttgcccgtacaccaatgggtggatttcttggtacactatc 449
Query: 135 atctttacctgccaccaagctgggatctatagctattgaagctgctcttaaaagggccca 194
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atctttacctgccac-aagctgggatctatagctattgaagctgctcttaaaagggccca 390
Query: 195 tgttgatccatcgcttgtacaagaagttttcttcggcaatgttctcagtgcaaatttagg 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgttgatccatcgcttgtacaagaagttttcttcggcaatgttctcagtgcaaatttagg 330
Query: 255 gcaggctcctgctagacaggctgcattaggtgcaggaatttctaattcagtagtctgtac 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gcaggctcctgctagacaggctgcattaggtgcaggaatttctaattcagtagtctgtac 270
Query: 315 tactgttaacaaagtttgtgcttcagggatgaaagcaactatgcttgctgcacagagtat 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 269 tactgttaacaaagtttgtgcttcagggatgaaagcaactatgcttgctgcacagggtat 210
Query: 375 tcagttaggcatcaatgatgttgttgtggctggaggaatggagagcatgtccaatactcc 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tcagttaggcatcaatgatgttgttgtggctggaggaatggagagcatgtccaatactcc 150
Query: 435 taaatacctggcagaagcaaggaagggatctcgacttggacatgattctctagttgatgg 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 taaatacctggcagaagcaaggaagggatctcgacttggacatgattctctagttgatgg 90
Query: 495 aatgctgaaagatgggttgtgggatgtttataatgatgttggcatgggaagttgtgctga 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aatgctgaaagatgggttgtgggatgtttataatgatgttggcatgggaagttgtgctga 30
Query: 555 aatatgtgcagataatcattcaataacaa 583
|||||||||||||||||||||||||||||
Sbjct: 29 aatatgtgcagataatcattcaataacaa 1
>KJC_c04516
Length = 1388
Score = 404 bits (204), Expect = e-112
Identities = 865/1081 (80%), Gaps = 7/1081 (0%)
Strand = Plus / Minus
Query: 75 agatgtttgcatcgtcggtgttgcccgtacaccaatgggtggatttcttggtacactatc 134
||||||||| |||| |||||||| || |||||||||||||| ||||||||| |||| ||
Sbjct: 1302 agatgtttgtgtcgtgggtgttgcacgcacaccaatgggtggttttcttggttcactttc 1243
Query: 135 atctttacctgccaccaagctgggatctatagctattgaagctgctcttaaaagggccca 194
|||| | | || || ||||| || |||||||||||| | ||||||||||||| || |
Sbjct: 1242 atctctttcagctacaaagctcggctctatagctattcagtctgctcttaaaagagcaaa 1183
Query: 195 tgttgatccatcgcttgtacaagaagttttcttcggcaatgttctcagtgcaaatttagg 254
|||||||||||| || || ||||| || ||||| ||||||||||| ||||| ||||||||
Sbjct: 1182 tgttgatccatcactcgtgcaagaggtcttctttggcaatgttcttagtgctaatttagg 1123
Query: 255 gcaggctcctgctagacaggctgcattaggtgcaggaatttctaattcagtagtctgtac 314
|| |||||||| || |||||||| |||||| | || ||| |||||||||| || ||
Sbjct: 1122 acaagctcctgcaaggcaggctgctttaggt-cgggtattcctaattcagtgaattgcac 1064
Query: 315 tactgttaacaaagtttgtgcttcagggatgaaagcaactatgcttgctgcacagagtat 374
|| |||| ||||||||| |||| |||||||||||||||||| ||||||||| |||||
Sbjct: 1063 cacaattaataaagtttgttcttcggggatgaaagcaactatgattgctgcactaagtat 1004
Query: 375 tcagttaggcatcaatgatgttgttgtggctggaggaatggagagcatgtccaatactcc 434
|| || || |||||| ||||||||| ||| || ||||| ||||||||||| | ||
Sbjct: 1003 ccaagcgggtattaatgatattgttgtggttggtgggatggaaagcatgtccaaagcacc 944
Query: 435 taaatacctggcagaagcaaggaagggatctcgacttggacatgattctctagttgatgg 494
||| || || ||||||||||| ||||| |||||||| ||||||||| | | |||| ||
Sbjct: 943 taagtatcttgcagaagcaagaaagggttctcgactaggacatgataccatcattgacgg 884
Query: 495 aatgctgaaagatgggttgtgggatgtttataatgatgttggcatgggaagttgtgctga 554
||||| |||||||| |||||||||| |||||||| |||| |||||| |||||| ||
Sbjct: 883 catgctcaaagatggtctgtgggatgtatataatgactttggaatgggagtttgtgcaga 824
Query: 555 aatatgtgcagataatcattcaataacaagggaggaccaggataactatgctattcagag 614
||| ||||| || | ||| ||| ||||| || || |||||| |||||| | | |||
Sbjct: 823 aatttgtgctgaccaacataaaattacaagagaagagcaggattcttatgctgtacggag 764
Query: 615 ttttgagcgtggtattgctgcacaagaaggtggtgcctttgcatgggaaatagttccggt 674
||||||||||| ||| |||||||| | |||||| ||| | ||| ||||||||||||
Sbjct: 763 ctttgagcgtggaatttctgcacaaaatggtggttttttttcgtgg--aatagttccggt 706
Query: 675 tgaagtttctgggggaaggggaaaaccttcaacaatcattgatagggatgaaggcatagg 734
||||||| |||||||||| || |||||| | || |||||| ||| ||||||||| ||||
Sbjct: 705 tgaagttcctgggggaagagggaaacctgccactatcattaataaggatgaaggtttagg 646
Query: 735 aaagtttgaccctgtaaaattgagaaagctccgaccaagtttcaaacaagatggaggcac 794
|| |||||| ||| ||||||||| ||||| ||||||||||||| | || || |
Sbjct: 645 aacgtttgatgctgcaaaattgaggaagcttagaccaagtttcaaggagaat---ggttc 589
Query: 795 agttactgctggcaatgcctctagcataagtgatggagctgctgctctagttttggtgag 854
||||| ||||| ||||| |||| |||||||||||| || ||||| |||| |||||||
Sbjct: 588 tgttacagctggaaatgcgtctatcataagtgatggtgcagctgcattagtgctggtgag 529
Query: 855 tggagagacagctcttaagcttggattgcaagtgattgcgaaaatcacagggtatgctga 914
||| || | ||| | | ||||||| |||||||||||||| | || | ||| ||||||||
Sbjct: 528 tggggaaaaagc-cattagcttggtttgcaagtgattgctaggataagaggatatgctga 470
Query: 915 tgcagctcaggcaccagagttatttacaacagctccagccctggcaatacctaaagcatt 974
||| || ||||| || ||||| ||| |||| || |||||||| |||||||| ||||| |
Sbjct: 469 tgctgcccaggcccctgagttgtttccaactgcaccagcccttgcaataccaaaagctat 410
Query: 975 atctagtgctggcttggatgcttctcaagtcgattactatgaaataaatgaagcttttgc 1034
|| | |||||| ||| | |||| || | |||||||| |||||||||||||| ||| |
Sbjct: 409 ttcaaatgctggtttgaagacttcccagattgattactacgaaataaatgaagcattttc 350
Query: 1035 tgttgtagctctttccaatcagaaactgcttggacttaatccagaaaaagttaatgtaca 1094
||| || |||||| ||||||| || || ||| ||||| ||||||||||| ||||| ||
Sbjct: 349 tgtcgtggctcttgccaatcaaaagcttcttaatcttaaaccagaaaaagtaaatgttca 290
Query: 1095 tggtggagctgtatccttgggacatccactaggttgcagtggagctcgtatattggtcac 1154
||||||||| ||||| |||||||||||| |||| |||||||| || || || ||||||||
Sbjct: 289 tggtggagcagtatctttgggacatccattaggatgcagtggggcacgcatcttggtcac 230
Query: 1155 a 1155
|
Sbjct: 229 a 229