Jatropha Genome Database
- JcCB0008071.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0008071.10 + phase: 0
(1143 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04815 1493 0.0
KJC_c00215 190 5e-48
KJC_c02807 72 3e-12
KJC_c02206 62 3e-09
KJC_c00598 58 5e-08
>KJC_c04815
Length = 845
Score = 1493 bits (753), Expect = 0.0
Identities = 767/774 (99%)
Strand = Plus / Plus
Query: 332 tctgttcatcatcacagaagcatgttgtttcaggcaacaaaagaggattttctgacacca 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctgttcatcatcacagaagcatgttgtttcaggcaacaaaagaggattttctgacacca 60
Query: 392 tggatggattctctgaggtaaagggttctgtgtattcagnnnnnnnctggttatttcact 451
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 tggatggattctctgaggtaaagggttctgtgtattcagaaaaaaactggttatttcact 120
Query: 452 cggctgggacagatactgattctctacaatctttgggacaagggaagttccccggtaatt 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggctgggacagatactgattctctacaatctttgggacaagggaagttccccggtaatt 180
Query: 512 ctgggataagtgcaatcttatcatctaggccatctgtggcccaatcagccatgatgaaag 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgggataagtgcaatcttatcatctaggccatctgtggcccaatcagccatgatgaaag 240
Query: 572 aggttcccaagaaagtgttacaggaccgatctcgtgctgccaatggaaccaacctcaacc 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggttcccaagaaagtgttacaggaccgatctcgtgctgccaatggaaccaacctcaacc 300
Query: 632 aggctggtgtttctaacaatagcagcagtgtccctgctgcgaaggcacaggttgttggtt 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggctggtgtttctaacaatagcagcagtgtccctgctgcgaaggcacaggttgttggtt 360
Query: 692 ggcctccaattaagtcatttaggaagaacacattagctacctcttcaaagaacaatgatg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcctccaattaagtcatttaggaagaacacattagctacctcttcaaagaacaatgatg 420
Query: 752 aagttgatggaaaaccaggtcttggtgctctttttatcaaggtcagcatggatggtgctc 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagttgatggaaaaccaggtcttggtgctctttttatcaaggtcagcatggatggtgctc 480
Query: 812 cttatttaaggaaagtggatctaagaacttactccacttatcaagaactctcttgtgctc 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttatttaaggaaagtggatctaagaacttactccacttatcaagaactctcttgtgctc 540
Query: 872 ttgagaagatgttcagttgttttaccataggtcaatgtggatctcatggagctcctggga 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgagaagatgttcagttgttttaccataggtcaatgtggatctcatggagctcctggga 600
Query: 932 aggaaaagctgagtgagattaaattaagggatcttctgaatggatcagagtatgtgctaa 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aggaaaagctgagtgagattaaattaagggatcttctgaatggatcagagtatgtgctaa 660
Query: 992 catacgaggataaggatggcgattggatgcttgttggggatgtgccatgggagatgttta 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 catacgaggataaggatggcgattggatgcttgttggggatgtgccatgggagatgttta 720
Query: 1052 ttgatacatgcaagaggctaaagatcatgaagagctctgatgcgattgggttag 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttgatacatgcaagaggctaaagatcatgaagagctctgatgcgattgggttag 774
>KJC_c00215
Length = 1768
Score = 190 bits (96), Expect = 5e-48
Identities = 260/312 (83%), Gaps = 2/312 (0%)
Strand = Plus / Plus
Query: 790 aaggtcagcatggatggtgctccttatttaaggaaagtggatctaagaacttactccact 849
||||| |||||||||||||||||||| || |||||||| || | |||| || || |
Sbjct: 1026 aaggttagcatggatggtgctccttacttgaggaaagttgacttgagaaactattctgca 1085
Query: 850 tatcaagaactctcttgtgctcttgagaagatgttcagttgttttaccataggtcaatgt 909
|| || ||| | |||| ||| || ||||||||||||||||| ||||| |||||||||| |
Sbjct: 1086 taccaggaattatcttctgccctcgagaagatgttcagttgctttacaataggtcaatat 1145
Query: 910 ggatctcatggagctcctgggaag-gaaaagctgagtgagattaaattaagggatcttct 968
||||||||||||| | ||||||| || | ||||||||||| || | | |||||| ||
Sbjct: 1146 ggatctcatggaggtt-tgggaagagagatgctgagtgagagcaagctgaaggatctgct 1204
Query: 969 gaatggatcagagtatgtgctaacatacgaggataaggatggcgattggatgcttgttgg 1028
|||| ||||| ||||| || ||||| |||||||| ||||| |||||||||||||||||
Sbjct: 1205 tcatggctcagaatatgttcttacatatgaggataaagatggtgattggatgcttgttgg 1264
Query: 1029 ggatgtgccatgggagatgtttattgatacatgcaagaggctaaagatcatgaagagctc 1088
||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||||
Sbjct: 1265 tgatgttccatgggagatgttcattgatacatgcaagaggctacggattatgaagagctc 1324
Query: 1089 tgatgcgattgg 1100
|||||| |||||
Sbjct: 1325 tgatgcaattgg 1336
>KJC_c02807
Length = 794
Score = 71.9 bits (36), Expect = 3e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 982 tatgtgctaacatacgaggataaggatggcgattggatgcttgttggggatgtgccatgg 1041
||||||| ||| || || ||||||||||| || |||||||| || || ||||| ||||||
Sbjct: 442 tatgtgccaacctatgaagataaggatggtgactggatgctcgtgggcgatgttccatgg 501
Query: 1042 gagatgtttattgatacatgcaag 1065
||||||||| ||||| ||||||||
Sbjct: 502 gagatgtttgttgattcatgcaag 525
>KJC_c02206
Length = 817
Score = 61.9 bits (31), Expect = 3e-09
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 961 gatcttctgaatggatcagagtatgtgctaacatacgaggataaggatggcgattggatg 1020
|||||||| |||| || || ||||| || ||||| || |||||||| || || ||||||
Sbjct: 427 gatcttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggatg 368
Query: 1021 cttgttggggatgtgccatgggagatgttta 1051
||||| || |||||||| |||||||||||||
Sbjct: 367 cttgtcggcgatgtgccctgggagatgttta 337
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 856 gaactctcttgtgctcttgagaagatgttcagttgttttac 896
|||||||| | |||||||||||||||||||||||| |||||
Sbjct: 529 gaactctcatctgctcttgagaagatgttcagttgctttac 489
>KJC_c00598
Length = 889
Score = 58.0 bits (29), Expect = 5e-08
Identities = 80/97 (82%)
Strand = Plus / Minus
Query: 968 tgaatggatcagagtatgtgctaacatacgaggataaggatggcgattggatgcttgttg 1027
||||||| || |||||||| | ||| || || || || ||||| || ||||||||||| |
Sbjct: 206 tgaatggttctgagtatgtaccaacttatgaagacaaagatggagactggatgcttgtag 147
Query: 1028 gggatgtgccatgggagatgtttattgatacatgcaa 1064
| |||||||| ||||| |||||||| ||| |||||||
Sbjct: 146 gagatgtgccttgggaaatgtttatcgattcatgcaa 110