Jatropha Genome Database

JcCB0005461.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0005461.10 - phase: 0 /pseudo/partial
         (1490 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08648                                                            252   2e-66

>KJC_c08648 
          Length = 755

 Score =  252 bits (127), Expect = 2e-66
 Identities = 127/127 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1335 atatgtgagagatcttcttctgaatcctcctgcttatgaaattgcatccaccattcaagc 1394
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34   atatgtgagagatcttcttctgaatcctcctgcttatgaaattgcatccaccattcaagc 93

                                                                        
Query: 1395 aatatgcaaacttatgagcaatgttacgtgctctatcccagaatttacttgtgtttcatc 1454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94   aatatgcaaacttatgagcaatgttacgtgctctatcccagaatttacttgtgtttcatc 153

                   
Query: 1455 tgcaaag 1461
            |||||||
Sbjct: 154  tgcaaag 160