Jatropha Genome Database
- JcCB0004891.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0004891.30 + phase: 0 /partial
(483 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04209 916 0.0
KJC_c04984 180 2e-45
>KJC_c04209
Length = 824
Score = 916 bits (462), Expect = 0.0
Identities = 482/487 (98%), Gaps = 5/487 (1%)
Strand = Plus / Minus
Query: 1 gagaagctagcgaaagttaatgatgttagattgggatttccctcttcgcataaagagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gagaagctagcgaaagttaatgatgttagattgggatttccctcttcgcataaagagaat 615
Query: 61 ccaattttgagagtggatgcttcaataagttcgttaggacttgttcaggaagatagaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ccaattttgagagtggatgcttcaataagttcgttaggacttgttcaggaagatagaagt 555
Query: 121 gttcaagtacagaatgtgcccaaaagtggtggcaggcaaaactcgtttgatgagatgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gttcaagtacagaatgtgcccaaaagtggtggcaggcaaaactcgtttgatgagatgaaa 495
Query: 181 caaaggtttctgaatttcaagcagtataaatatttaaaggaagctgagcattttaaaaat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 494 caaaggtttctgaatttcaagcagtataaatatttaaaggaagctgagcatttt-aaaat 436
Query: 241 cttgctgaattgcaatctccaaagtttatggtgattgcttgtgtagactctagggtttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cttgctgaattgcaatctccaaagtttatggtgattgcttgtgtagactctagggtttgt 376
Query: 301 ccatctaacattcttggatttcaacctggagaagcttttacggttagaaatgttgcaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ccatctaacattcttggatttcaacctggagaagcttttacggttagaaatgttgcaaat 316
Query: 361 attgtgcctccacttgagaatggaccaacagaaacaaatgctgcacttgagtttgctgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 attgtgcctccacttgagaatggaccaacagaaacaaatgctgcacttgagtttgctgta 256
Query: 421 aatactcttgaa----aaaatatatttgtcattggccacagcaactgtgcaggaattcaa 476
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aatactcttgaagttgaaaatatatttgtcattggccacagcaactgtgcaggaattcaa 196
Query: 477 gctctca 483
|||||||
Sbjct: 195 gctctca 189
>KJC_c04984
Length = 488
Score = 180 bits (91), Expect = 2e-45
Identities = 151/171 (88%)
Strand = Plus / Minus
Query: 259 ccaaagtttatggtgattgcttgtgtagactctagggtttgtccatctaacattcttgga 318
|||||||||||||| |||||||||| |||||| |||||||| ||||| ||||| || |||
Sbjct: 283 ccaaagtttatggtaattgcttgtgcagactccagggtttgcccatcgaacatactggga 224
Query: 319 tttcaacctggagaagcttttacggttagaaatgttgcaaatattgtgcctccacttgag 378
|| ||||| |||||||| ||| ||||||||||||||||||||| |||||| || ||||
Sbjct: 223 ttccaaccaggagaagcatttgtggttagaaatgttgcaaatatggtgccttcatatgag 164
Query: 379 aatggaccaacagaaacaaatgctgcacttgagtttgctgtaaatactctt 429
| ||||||| |||||||||||||||||||||| |||||||||||| |||||
Sbjct: 163 agtggaccatcagaaacaaatgctgcacttgaatttgctgtaaattctctt 113