Jatropha Genome Database
- JcCB0004411.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0004411.20 - phase: 0
(1788 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08914 1281 0.0
>KJC_c08914
Length = 678
Score = 1281 bits (646), Expect = 0.0
Identities = 673/678 (99%), Gaps = 3/678 (0%)
Strand = Plus / Minus
Query: 100 aagagagaagataggaagtcattaat-agtgacagagtatggacaaatctcagctgtt-g 157
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 678 aagagagaagataggaagtcattaattagtgacagagtatggacaaatctcagctgtttg 619
Query: 158 atatttcc-actggaacaattggagattaccatcttgagtttattacattagagcctaat 216
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 atatttcctactggaacaattggagattaccatcttgagtttattacattagagcctaat 559
Query: 217 tcattgtttcttcctgttattctacattctgacatggtgttttatgtcaatacagggagt 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tcattgtttcttcctgttattctacattctgacatggtgttttatgtcaatacagggagt 499
Query: 277 gggagactgagttgggctgaaggtggaaaagaactgaagagaatggatataaagaaagga 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gggagactgagttgggctgaaggtggaaaagaactgaagagaatggatataaagaaagga 439
Query: 337 gatgtgtataggttacatccaggctcagttttctttatgcaaagtaacttagagacagaa 396
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 438 gatgtgtataggttacatccaggctcagttttctttatgaaaagtaacttagagacagaa 379
Query: 397 agaaagaagctaaggatttatgctatcttttcaaatgcagatgaaggaacctatgagcca 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agaaagaagctaaggatttatgctatcttttcaaatgcagatgaaggaacctatgagcca 319
Query: 457 cacattggagcatactctagcatcaatgatctagtccttggctttgatacgaaactcctc 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cacattggagcatactctagcatcaatgatctagtccttggctttgatacgaaactcctc 259
Query: 517 caatcagcttttaaggttcctgaggaggtaatagaagaaatgaaaagtgcgatgaggcca 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 caatcagcttttaaggttcctgaggaggtaatagaagaaatgaaaagtgcgatgaggcca 199
Query: 577 ccagatatagtgcacgcagcgccacagaaaaaatcaatacttttggagatagaagataga 636
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 198 ccagatatagtgcacgcagcgccacagaaaaaatcaatatttttggagatagaagataga 139
Query: 637 ctattacaagcttttgttgggaacaaagatggtaccttgtatagcagcaatggtggccac 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ctattacaagcttttgttgggaacaaagatggtaccttgtatagcagcaatggtggccac 79
Query: 697 aagaaaaccaagaaagttaaccttttagatggtaaaccagattttgagaactgtaatggg 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 aagaaaaccaagaaagttaaccttttagatggtaaaccagattttgagaactgtaatggg 19
Query: 757 tggagtgtgactgtggac 774
||||||||||||||||||
Sbjct: 18 tggagtgtgactgtggac 1