Jatropha Genome Database

JcCB0004391.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0004391.10 - phase: 0 
         (1005 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c12372                                                             68   4e-11

>KJC_c12372 
          Length = 495

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 271 atgaatttgagtctaatgctcaactctgttggattttatcagatttcaaagttgagtatg 330
           |||||| ||||| |||||   ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 338 atgaatgtgagtttaatgtggaactcagttggattttatcagattgcaaagttgagtatg 279

             
Query: 331 at 332
           ||
Sbjct: 278 at 277