Jatropha Genome Database

JcCB0004221.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0004221.20 + phase: 0 
         (348 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00296                                                             52   9e-07

>KJC_c00296 
          Length = 1555

 Score = 52.0 bits (26), Expect = 9e-07
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 280 accaagggtgatttgaaggaagttagagaagagattgctaagtacaaggt 329
           |||||||||||| | |||||||| || |||||| ||||||| ||||||||
Sbjct: 432 accaagggtgatctcaaggaagtgagcgaagaggttgctaaatacaaggt 481