Jatropha Genome Database
- JcCB0004021.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0004021.10 + phase: 0
(1170 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08048 1697 0.0
>KJC_c08048
Length = 886
Score = 1697 bits (856), Expect = 0.0
Identities = 884/888 (99%), Gaps = 4/888 (0%)
Strand = Plus / Minus
Query: 213 ccagattatcatcaacggtgccgcacttctctcgtgttctcaagtggttcagccgccgac 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 ccagattatcatcaacggtgccgcacttctctcgtgttctcaagtggttcagccgccgac 827
Query: 273 cgccgttaaaccggatgagaagcttttggatctacccgatctgaaaattttaacaacaaa 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 cgccgttaaaccggatgagaagcttttggatctacccgatctgaaaattttaacaacaaa 767
Query: 333 acctaatgttttaaaccataactcggagaaagtaaaatccgccgccgcagcgatggtggc 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 acctaatgttttaaaccataactcggagaaagtaaaatccgccgccgcagcgatggtggc 707
Query: 393 ggctttagagtccaatttaaaggtggaggaaggagatgaatgtgatctggattatgatat 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ggctttagagtccaatttaaaggtggaggaaggagatgaatgtgatctggattatgatat 647
Query: 453 tgtcgagctagatgaggtggaattgctggcggagcatgttcatttctgtgaaatatgcgg 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tgtcgagctagatgaggtggaattgctggcggagcatgttcatttctgtgaaatatgcgg 587
Query: 513 caaaggattcaagcgggacgctaatttgcggatgcacatgagggcccatggaaatcagtt 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 caaaggattcaagcgggacgctaatttgcggatgcacatgagggcccatggaaatcagtt 527
Query: 573 caaaactccagaggcgctcgcgaagcctgataaaggaaacgaattttcagcggaggtaaa 632
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 526 caaaactccagaggcgctcgcgaagcctgataaaggaaacgaa-tttcagcggaggtaaa 468
Query: 633 gaaaactagattctcttgtccttttttggg-atgtaaccgaaacaagaag-cataaaaag 690
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 467 gaaaactagattctcttgtccttttttgggtatgtaaccgaaacaagaagacataaaaag 408
Query: 691 tttaggccactaaaatcggtgatttgtgttcgaaatcatttcaaaagaagtcattgtcca 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tttaggccactaaaatcggtgatttgtgttcgaaatcatttcaaaagaagtcattgtcca 348
Query: 751 aagatgttctcctgtaaccgttgcaataagaagagtttctctgttgtggcggatttgaag 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aagatgttctcctgtaaccgttgcaataagaagagtttctctgttgtggcggatttgaag 288
Query: 811 agtcatttgaagcattgtggagagtccaaatggaaatgctcatgtgggactactttttct 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 agtcatttgaagcattgtggagagtccaaatggaaatgctcatgtgggactactttttct 228
Query: 871 agaaaggataagttgtttgggcacatagcattgtttgaaggccacgtgcctgctgttatt 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agaaaggataagttgtttgggcacatagcattgtttgaaggccacgtgcctgctgttatt 168
Query: 931 ggggaagatgatgacagagtagctaaagactgtttggtagctatggaggaagatgaagcc 990
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 167 ggggaagatgatgacagagtagctaaagactg-ttggtagctatggaggaagatgaagcc 109
Query: 991 gaagaagggattgttaagggagaaaaggatagaaattgtacggatgatgggttttttgaa 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 gaagaagggattgttaagggagaaaaggatagaaattgtacggatgatgggttttttgaa 49
Query: 1051 gaattgcttgatgggcttggttcaattgagggatataatttgcaggat 1098
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 gaattgcttgatgggcttggttcaattgagggatataatttgcaggat 1