Jatropha Genome Database
- JcCB0003421.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0003421.10 - phase: 2 /partial
(802 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03205 1417 0.0
>KJC_c03205
Length = 1523
Score = 1417 bits (715), Expect = 0.0
Identities = 725/727 (99%), Gaps = 1/727 (0%)
Strand = Plus / Plus
Query: 1 ggctcatgattttagcactgatatcttcgatgatcgaacagttatcctttgtgaccaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ggctcatgattttagcactgatatcttcgatgatcgaacagttatcctttgtgaccaatg 857
Query: 61 cgagagagaattccatgttgggtgcttgcgtgacagcggacgttgtgatctaaaagagat 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 cgagagaga-ttccatgttgggtgcttgcgtgacagcggacgttgtgatctaaaagagat 916
Query: 121 ccctaaggataattggttctgttctaatgactgccatagaatctttgcggctctacagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 ccctaaggataattggttctgttctaatgactgccatagaatctttgcggctctacagga 976
Query: 181 ttttgtttctagtggaatacagatgattccttctttgcagttggatatcataactagaaa 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 977 ttttgtttctagtggaatacagatgattccttctttgcagttgggtatcataactagaaa 1036
Query: 241 gcatgctgagaaaggattattaatggatggactatcaaatgatgtccaatggcgaattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 gcatgctgagaaaggattattaatggatggactatcaaatgatgtccaatggcgaattct 1096
Query: 301 gatgggaaaaagtcgccgcaaagaagatctttcattgttgtcagctactgctgcaatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 gatgggaaaaagtcgccgcaaagaagatctttcattgttgtcagctactgctgcaatttt 1156
Query: 361 tcgagagtgttttgatcccattgttgcaaaaactggtcgtgatttgattcctgttatggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 tcgagagtgttttgatcccattgttgcaaaaactggtcgtgatttgattcctgttatggt 1216
Query: 421 ctatgggagaaatatttctggccaagaatttgggggaatgtactgtgtgctattacttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 ctatgggagaaatatttctggccaagaatttgggggaatgtactgtgtgctattacttgt 1276
Query: 481 gaagaatgtcgttgtatcagctggtcttcttaggatttttggtagggaggctgctgagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 gaagaatgtcgttgtatcagctggtcttcttaggatttttggtagggaggctgctgagct 1336
Query: 541 tcctctagttgcaacgagtagagaacatcaaggaaaaggttacttccaagcattattctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 tcctctagttgcaacgagtagagaacatcaaggaaaaggttacttccaagcattattctc 1396
Query: 601 atgcattgagagattactttgctccctcaatgtggtaaacttggtgctaccagcagctga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 atgcattgagagattactttgctccctcaatgtggtaaacttggtgctaccagcagctga 1456
Query: 661 ggaagctgagtcaatttggacaaggagatttggcttcagaaagatgagcgagggacaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 ggaagctgagtcaatttggacaaggagatttggcttcagaaagatgagcgagggacaact 1516
Query: 721 gtcaaaa 727
|||||||
Sbjct: 1517 gtcaaaa 1523