Jatropha Genome Database

JcCB0003261.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0003261.20 - phase: 0 
         (1326 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10057                                                            773   0.0  

>KJC_c10057 
          Length = 401

 Score =  773 bits (390), Expect = 0.0
 Identities = 397/398 (99%), Gaps = 1/398 (0%)
 Strand = Plus / Minus

                                                                        
Query: 836  agaagaatatgccaaaattaatggcaagggatccagatgcactggcatatgccataaagc 895
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401  agaagaatatgccaaa-ttaatggcaagggatccagatgcactggcatatgccataaagc 343

                                                                        
Query: 896  gttcatgtgaaaataaggctgaggtcgtatccttggatgagaaggaaagtggactaaggg 955
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342  gttcatgtgaaaataaggctgaggtcgtatccttggatgagaaggaaagtggactaaggg 283

                                                                        
Query: 956  caacactgaacttgggtcatacatttggccatgcaatagaaactggctttggatatgggc 1015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282  caacactgaacttgggtcatacatttggccatgcaatagaaactggctttggatatgggc 223

                                                                        
Query: 1016 agtggcttcacggagaagctgttgcagccggcatggtgatggctgttgacatgtcatacc 1075
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222  agtggcttcacggagaagctgttgcagccggcatggtgatggctgttgacatgtcatacc 163

                                                                        
Query: 1076 gccttggttggattgatgattcaattgtaaagcgagttcataacattcttcaacaggcta 1135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162  gccttggttggattgatgattcaattgtaaagcgagttcataacattcttcaacaggcta 103

                                                                        
Query: 1136 agttacccaccgcgccaccagacaccatgactgtagaaatgtttaaatccgtcatggcgg 1195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102  agttacccaccgcgccaccagacaccatgactgtagaaatgtttaaatccgtcatggcgg 43

                                                  
Query: 1196 ttgataagaaggtagctgatgggctgctaagacttatc 1233
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 42   ttgataagaaggtagctgatgggctgctaagacttatc 5