Jatropha Genome Database
- JcCB0003071.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0003071.20 + phase: 0
(1299 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c12620 230 7e-60
KJC_c10072 145 3e-34
KJC_c06517 66 2e-10
>KJC_c12620
Length = 717
Score = 230 bits (116), Expect = 7e-60
Identities = 377/460 (81%), Gaps = 3/460 (0%)
Strand = Plus / Minus
Query: 226 tggcgagatgatgacaaagatggacattacatgtttgctctcggggagaatttaacctct 285
||||| || |||||||| ||||| |||||||||||||| || || || |||||||| |||
Sbjct: 515 tggcgggaagatgacaaggatggccattacatgtttgcgcttggaga-aatttaacatct 457
Query: 286 cgctacaagatccagagaaaaattggtgaaggaactttcggtcaggttttggaatgctgg 345
||||| ||||| || || || || |||||||||||||| ||||||||||| |||||||||
Sbjct: 456 cgctataagatacacagcaagatgggtgaaggaacttttggtcaggttttagaatgctgg 397
Query: 346 gatagg-gaagcaagggaggtggttgccataaaggttgttcgaagcacaaagaaataccg 404
||||| ||| || |||| ||||||| || || |||| || | | ||||| || ||
Sbjct: 396 gatagtagaaagaaaggagatggttgcaatcaaaattgtccgcgggattaagaagtatcg 337
Query: 405 cgaagcagcaatgttggaaattgacatgctccacttgcttggaaagtatgacagaaatgg 464
||||| || ||| | || || || | || || |||||| || |||| | | |||
Sbjct: 336 tgaagctgctatgatagagatcgatgtcctgcaacagcttggtaaacatgataaaggtgg 277
Query: 465 cagtcgttgtgtccaaatacgaaactggtttgattatcgtaacca-tatctgtattgtat 523
|| ||||||||| |||||| | ||||||||||| ||||||||||| |||||||||||| |
Sbjct: 276 caatcgttgtgtgcaaataaggaactggtttgactatcgtaaccagtatctgtattgtct 217
Query: 524 ttgagatgcttggaccaagcttgtatgattttcttcggaaaaataattatcgcccatttc 583
|||||| ||||||||||||||| || ||||||||||| ||||| ||||||||| ||||||
Sbjct: 216 ttgagaagcttggaccaagcttatacgattttcttcgcaaaaacaattatcgctcatttc 157
Query: 584 cggttgatcttgtccgtgagcttggcagacaactcttggaatgtgtagcattcatgcatg 643
| ||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||
Sbjct: 156 ccattgatcttgtccgtgagattggaagacaactattggaatgtgtagcatttatgcatg 97
Query: 644 atttgcgcctaatccatacagacttgaaaccagagaacat 683
| ||||| || || ||||| || ||||| || ||||||||
Sbjct: 96 acttgcgactgattcatactgatttgaagcctgagaacat 57
>KJC_c10072
Length = 788
Score = 145 bits (73), Expect = 3e-34
Identities = 160/189 (84%)
Strand = Plus / Plus
Query: 462 tggcagtcgttgtgtccaaatacgaaactggtttgattatcgtaaccatatctgtattgt 521
||||| ||||||||| |||||||| || |||||||| |||||||| ||||| ||||||||
Sbjct: 480 tggcactcgttgtgtgcaaatacggaattggtttgactatcgtaatcatatttgtattgt 539
Query: 522 atttgagatgcttggaccaagcttgtatgattttcttcggaaaaataattatcgcccatt 581
||||||| ||||||||||||||| || |||||||| || ||||| | || || ||||
Sbjct: 540 ctttgagaagcttggaccaagcttatacgattttctccgcaaaaacagctaccgttcatt 599
Query: 582 tccggttgatcttgtccgtgagcttggcagacaactcttggaatgtgtagcattcatgca 641
||| |||||||||| || ||||||||||||||||| ||||| | ||| ||||| |||||
Sbjct: 600 tcccattgatcttgttcgggagcttggcagacaacttttggagtctgttgcatttatgca 659
Query: 642 tgatttgcg 650
||| |||||
Sbjct: 660 tgaattgcg 668
>KJC_c06517
Length = 522
Score = 65.9 bits (33), Expect = 2e-10
Identities = 129/161 (80%)
Strand = Plus / Plus
Query: 862 cgtgcacctgaggttattctagggtttggatggagttatccatgtgacatatggagtgtt 921
|||||||| |||||||| |||| ||||||||| ||||| ||||| |||||||||||
Sbjct: 193 cgtgcaccagaggttatcttaggacttggatggaactatccttgtgatttatggagtgtt 252
Query: 922 ggttgtatcttggtggaactttgctcgggagaagcattatttcagacgcatgagaattta 981
||||| || | || ||| | ||||| || || || | ||||| || |||||||| |||
Sbjct: 253 ggttgcatacttgttgaattatgctctggtgaggccctttttcaaacacatgagaactta 312
Query: 982 gagcatttggccatgatggagagggttttaggaccattgcc 1022
|| ||| | ||||||||||| ||||||||||| ||| ||||
Sbjct: 313 gaacatcttgccatgatggaaagggttttagggccactgcc 353