Jatropha Genome Database
- JcCB0003071.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0003071.10 - phase: 0
(1515 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04580 997 0.0
KJC_c09795 894 0.0
>KJC_c04580
Length = 623
Score = 997 bits (503), Expect = 0.0
Identities = 517/519 (99%), Gaps = 2/519 (0%)
Strand = Plus / Plus
Query: 1 atgtttctctatggcttacccttttgggtacttgttcttctactgcctttactacttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atgtttctctatggcttacccttttgggtacttgttcttctactgcctttactacttgta 165
Query: 61 attattagaaagattaaagttcaaagagaaaacaaccaacttccaccaagccctgctaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 attattagaaagattaaagttcaaagagaaaacaaccaacttccaccaagccctgctaaa 225
Query: 121 cttccaattataggaaacctgcatcaacttagaggatcgccccaccgagctttctggcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 cttccaattataggaaacctgcatcaacttagaggatcgccccaccgagctttctggcaa 285
Query: 181 ctttcgaagaaatatggccctgttatgcttctccaatttggtagtgtgcctgctgttata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctttcgaagaaatatggccctgttatgcttctccaatttggtagtgtgcctgctgttata 345
Query: 241 atatcctcagctgaagcagcagaagaggcattaaagattcatgatctttcttgttgcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 atatcctcagctgaagcagcagaagaggcattaaagattcatgatctttcttgttgcagt 405
Query: 301 agacctccattagctggtgctgcaagactttcatacaattatttagatgtagctttttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 agacctccattagctggtgctgcaagactttcatacaattatttagatgtagctttttca 465
Query: 361 ccatatggtgattactggagagagattaggagaatatgtgttcttgag-ctttttagcac 419
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 466 ccatatggtgattactggagagagattaggagaatatgtgttcttgagtctttttagcac 525
Query: 420 gaaaagggtgcagtcgtttcagttcgttagagaagaagaagttggtttgctgataaattc 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 526 gaaaagggtgcagtcgtttcagttcgttagagaagaagaagttggtttgctgat-aattc 584
Query: 480 aatctctcagtcatcctcttctgctactcctgttgatct 518
|||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aatctctcagtcatcctcttctgctactcctgttgatct 623
>KJC_c09795
Length = 468
Score = 894 bits (451), Expect = 0.0
Identities = 451/451 (100%)
Strand = Plus / Minus
Query: 1065 ttatatcaagatggtaataaaggaaactttgagattgcaccctcctgctccattgctact 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ttatatcaagatggtaataaaggaaactttgagattgcaccctcctgctccattgctact 409
Query: 1125 tccaagagaagctatctcgaattttaaaatcaatggttacagaattcatccaaaaacact 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tccaagagaagctatctcgaattttaaaatcaatggttacagaattcatccaaaaacact 349
Query: 1185 aatccaagtaaatgtttgggcaatcggacgagatcccaactactggaagaacccagaaga 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aatccaagtaaatgtttgggcaatcggacgagatcccaactactggaagaacccagaaga 289
Query: 1245 attcttccctgaaagatttgtggatagctccattgattttaaaggacaaaattttgagtt 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 attcttccctgaaagatttgtggatagctccattgattttaaaggacaaaattttgagtt 229
Query: 1305 tctgccatttggagctggtagaagaggttgtcctgcactgtatatgggaactatattagt 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tctgccatttggagctggtagaagaggttgtcctgcactgtatatgggaactatattagt 169
Query: 1365 ggagcttgtaattgcaaatttattatattgttttgattggagactaccaaatggagaaga 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ggagcttgtaattgcaaatttattatattgttttgattggagactaccaaatggagaaga 109
Query: 1425 aaatatcaacatggaagagcaagctggtcctagtcttaccgtatctaaaaaggaagctgt 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 aaatatcaacatggaagagcaagctggtcctagtcttaccgtatctaaaaaggaagctgt 49
Query: 1485 caaacttgttccttccaggtacctccaatag 1515
|||||||||||||||||||||||||||||||
Sbjct: 48 caaacttgttccttccaggtacctccaatag 18