Jatropha Genome Database

JcCB0001101.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0001101.20 + phase: 0 
         (237 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05262                                                            345   3e-95

>KJC_c05262 
          Length = 301

 Score =  345 bits (174), Expect = 3e-95
 Identities = 174/174 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggaaacaaccagtaagaatgaaggcggtggtttacgctctttcgccatttcagcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  atggggaaacaaccagtaagaatgaaggcggtggtttacgctctttcgccatttcagcag 127

                                                                       
Query: 61  aagataatgcctggtttatggaaggatctgcctaacaagatccatcacaaggtgtcagag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 aagataatgcctggtttatggaaggatctgcctaacaagatccatcacaaggtgtcagag 187

                                                                 
Query: 121 aactggatcagcgccaccctccttctcacccctctcatcggcacctacacgtat 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 aactggatcagcgccaccctccttctcacccctctcatcggcacctacacgtat 241