Jatropha Genome Database
- JcCA0317901.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317901.20 + phase: 0
(2658 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09066 182 3e-45
KJC_c10498 66 5e-10
KJC_c09094 62 7e-09
>KJC_c09066
Length = 645
Score = 182 bits (92), Expect = 3e-45
Identities = 254/308 (82%)
Strand = Plus / Plus
Query: 1093 tttgctcctcagttcagtgggtttaatcaacatgattctcaggaactccttgctttcttg 1152
||||||||||| |||||||| | ||| || ||||||||||| ||| | ||||| || |||
Sbjct: 102 tttgctcctcaattcagtggttataaccagcatgattctcaagaatttcttgcctttttg 161
Query: 1153 ttggatggacttcatgaggatctgaatcgtgtgaaatccaagccttatgtagaagccaaa 1212
||||||||||||||||| ||| ||||||| ||||||| ||||||||| |||||| |||
Sbjct: 162 ttggatggacttcatgaagatttgaatcgcgtgaaatgcaagccttacatagaagttaaa 221
Query: 1213 gatggagagggcagaccagatgaagaagtagctgatgaatattggcggaatcatgtggct 1272
|||| ||||| | | ||||| ||||||| || |||||||||||| ||||||| |||||
Sbjct: 222 gatgcagaggaccgtccagacaaagaagtggcagatgaatattggaagaatcatctggct 281
Query: 1273 cgcaatgactctattattgttgatgtctgccagggtcaatataagtcaacattagtctgt 1332
||||||||||| || || |||||| | | |||||||||||| ||||| || || ||
Sbjct: 282 cgcaatgactccatcatagttgatttatttcagggtcaatatcgttcaacgttggtttgc 341
Query: 1333 ccaatttgcaagaaggtatcggttacatttgatccattcatgtacttatcactacctcta 1392
|| | |||||||||| || ||||||||||||||||| |||||| |||| || ||| ||
Sbjct: 342 cccaattgcaagaagaagtctgttacatttgatccatttatgtacctatcgctgccttta 401
Query: 1393 ccttcaac 1400
||||||||
Sbjct: 402 ccttcaac 409
>KJC_c10498
Length = 491
Score = 65.9 bits (33), Expect = 5e-10
Identities = 85/101 (84%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 1084 cttgctcgatttgctcctcagttcagtgggtttaatcaacatgattctcaggaactcctt 1143
||||||| |||||||| || |||||||| | |||||| || |||||||| ||||| |||
Sbjct: 281 cttgctctttttgctccacaattcagtggttataatcagcacgattctcaagaacttctt 222
Query: 1144 gctttcttgttggatggacttcatgaggatctgaatcgtgt 1184
|| || || ||||||| |||||||| ||||||||||||||
Sbjct: 221 gcctt-ttactggatgggcttcatgaagatctgaatcgtgt 182
Score = 60.0 bits (30), Expect = 3e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1269 ggctcgcaatgactctattattgttgatgtctgccagggtcaatataagtcaacattagt 1328
|||||| ||||| ||| | ||||| ||||| |||||||||||||||||||| ||| | ||
Sbjct: 97 ggctcgaaatgattctgtaattgtggatgtttgccagggtcaatataagtcgacactggt 38
Query: 1329 ctgtccaatttgca 1342
||| ||| ||||||
Sbjct: 37 ctgcccagtttgca 24
>KJC_c09094
Length = 565
Score = 61.9 bits (31), Expect = 7e-09
Identities = 142/179 (79%)
Strand = Plus / Plus
Query: 2263 atgtggttctgtccaagttgcaagaaacatcggcaagccagtaaaaaattggacctttgg 2322
||||||| |||||| ||||| || || | |||||||| ||||||| || || ||||||
Sbjct: 8 atgtggtactgtcccagttgtaaaaagccacggcaagctagtaaaaggttagatctttgg 67
Query: 2323 aggctgccagaaattctggttattcatctaaaaagattctcttatacccgattcatgaag 2382
|| || || || || ||||| ||||| |||| || ||||| |||| ||| |||| |||
Sbjct: 68 agactacctgagatattggttgttcatttaaagaggttctcatatagtcgaatcattaag 127
Query: 2383 aacaagcttgaggcatatgttgacttccctgttgatgatctagatttgtcaacttacat 2441
|||||| | || |||||||||||||||||||||| || | ||| | |||||||||||
Sbjct: 128 aacaagttggaaacatatgttgacttccctgttgagcattttgatctttcaacttacat 186