Jatropha Genome Database
- JcCA0317901.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317901.10 - phase: 0 /partial
(773 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c12984 1487 0.0
>KJC_c12984
Length = 844
Score = 1487 bits (750), Expect = 0.0
Identities = 771/774 (99%), Gaps = 3/774 (0%)
Strand = Plus / Minus
Query: 1 atgactcccaccggaattctcgccggactcttcctcgttttagcattgtactgtggtatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 atgactcccaccggaattctcgccggactcttcctcgttttagcattgtactgtggtatc 745
Query: 61 gacccatttaagcacagtgcaa-tctcagattttccagaattcaaggcaatcaaagttga 119
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 744 gacccatttaagcacagtgcaaatctcagattttccagaattcaaggcaatcaaagttga 685
Query: 120 catgcctgattggtcacttgttcctactgacaaagacaaagataacttactccaaagatc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 catgcctgattggtcacttgttcctactgacaaagacaaagataacttactccaaagatc 625
Query: 180 tgaaattaagttcttgaatcaagttcaaggccctgagagtatcgcctttgaccctcttgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgaaattaagttcttgaatcaagttcaaggccctgagagtatcgcctttgaccctcttgg 565
Query: 240 ccgcgggccttacactggtattgcggatggcagaattgtcttctggaatggtcagaaatg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccgcgggccttacactggtattgcggatggcagaattgtcttctggaatggtcagaaatg 505
Query: 300 gactgatttcgcttacacttcatctaataggtcagaaatatgtgatccaaaaccttcgcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 504 gactgatttcgcttacacttcatctaataggtcagaaatatgtgatccaaa-ccttcgcc 446
Query: 360 tttgagttatttgaagaatgaacacatctgcggtaggcctttagggcttcgatttgataa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttgagttatttgaagaatgaacacatctgcggtaggcctttagggcttcgatttgataa 386
Query: 420 gaaaaccggtgatttatacattgctgatgcatatcttggactgatgaaggtggggccaga 479
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaa-ccggtgatttatacattgctgatgcatatcttggactgatgaaggtggggccaga 327
Query: 480 aggtggttcggcaacttcactaacaactgaggctgaaggagtcccactgaggtttaccaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aggtggttcggcaacttcactaacaactgaggctgaaggagtcccactgaggtttaccaa 267
Query: 540 tgatctagacattgatgatgaagggaacatttactttacagatagcagtactcaatacca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgatctagacattgatgatgaagggaacatttactttacagatagcagtactcaatacca 207
Query: 600 gaggaggaacttcatgcaattggttttttctgcggatgatagtgggagggttctaaagta 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaggaggaacttcatgcaattggttttttctgcggatgatagtgggagggttctaaagta 147
Query: 660 caatccaactacaaaggaaaccactgtccttgtgaggaatcttcaatttccaaatggtct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 caatccaactacaaaggaaaccactgtccttgtgaggaatcttcaatttccaaatggtct 87
Query: 720 gtccttaagcaaggatggtaccttctttgtcttctgtgaaggatccattggcag 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 gtccttaagcaaggatggtaccttctttgtcttctgtgaaggatccattggcag 33