Jatropha Genome Database
- JcCA0317741.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317741.10 + phase: 1 /partial
(587 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03455 1082 0.0
KJC_c06000 200 3e-51
KJC_c06403 198 1e-50
KJC_c02058 155 1e-37
>KJC_c03455
Length = 647
Score = 1082 bits (546), Expect = 0.0
Identities = 546/546 (100%)
Strand = Plus / Plus
Query: 42 attgaaggaaggggcaaatcagttgtttgtgaggcaattatcaaggaagaggtggtgaaa 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgaaggaaggggcaaatcagttgtttgtgaggcaattatcaaggaagaggtggtgaaa 60
Query: 102 aatgtattaaaaaccaatgttgcttccctagtggagctcaacatgctaaaaaatcttgct 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgtattaaaaaccaatgttgcttccctagtggagctcaacatgctaaaaaatcttgct 120
Query: 162 ggttctgctattgctggtgctctgggtgggtttaatgctcatgcaggaaacattgtctct 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggttctgctattgctggtgctctgggtgggtttaatgctcatgcaggaaacattgtctct 180
Query: 222 gcaatctttattgcaactggccaggatccagcacagaatattgagagttctcactgcatt 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcaatctttattgcaactggccaggatccagcacagaatattgagagttctcactgcatt 240
Query: 282 acgatgatggaagctgttaatgatggaaaggatctccatgtctcagtgtcaatgccttcc 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acgatgatggaagctgttaatgatggaaaggatctccatgtctcagtgtcaatgccttcc 300
Query: 342 attgaggtgggtacagttggaggaggaactcaacttgcatctcagtctgcttgtctaaat 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attgaggtgggtacagttggaggaggaactcaacttgcatctcagtctgcttgtctaaat 360
Query: 402 ttgcttggggtgaagggggcaagcaaagagtcaccaggatcaaactcaaggctccttgcc 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgcttggggtgaagggggcaagcaaagagtcaccaggatcaaactcaaggctccttgcc 420
Query: 462 accatagtagctggttcagttttggccggtgagctgtctctgatgtctgccattgcagct 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accatagtagctggttcagttttggccggtgagctgtctctgatgtctgccattgcagct 480
Query: 522 gggcagcttgtcaacagccacatgaaatacaatagatccagcaaagatgtatcgagagtt 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggcagcttgtcaacagccacatgaaatacaatagatccagcaaagatgtatcgagagtt 540
Query: 582 gcatca 587
||||||
Sbjct: 541 gcatca 546
>KJC_c06000
Length = 517
Score = 200 bits (101), Expect = 3e-51
Identities = 272/329 (82%)
Strand = Plus / Minus
Query: 243 caggatccagcacagaatattgagagttctcactgcattacgatgatggaagctgttaat 302
|||||||| || || ||| | |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 477 caggatcccgcccaaaatgtggagagttctcactgtattaccatgatggaagctgttaat 418
Query: 303 gatggaaaggatctccatgtctcagtgtcaatgccttccattgaggtgggtacagttgga 362
||||| || || || || ||||||| | |||||||||||||||||||||||||| |||
Sbjct: 417 gatggcaaagaccttcacatctcagtcaccatgccttccattgaggtgggtacagtagga 358
Query: 363 ggaggaactcaacttgcatctcagtctgcttgtctaaatttgcttggggtgaagggggca 422
|| || |||||||| ||||| || || ||||| || || | ||||||||||| || |||
Sbjct: 357 ggtggcactcaactggcatcgcaatcagcttgcctgaacctacttggggtgaaaggtgca 298
Query: 423 agcaaagagtcaccaggatcaaactcaaggctccttgccaccatagtagctggttcagtt 482
|||||||||| |||||| ||||| |||||||| || || | || || |||||||| |||
Sbjct: 297 agcaaagagttaccagggtcaaattcaaggcttctggctagtattgtggctggttctgtt 238
Query: 483 ttggccggtgagctgtctctgatgtctgccattgcagctgggcagcttgtcaacagccac 542
| || || || |||||||| |||||||| |||||||||| || || || || ||||||
Sbjct: 237 cttgcaggggaactgtctctcatgtctgctcttgcagctggacaactggttaagagccac 178
Query: 543 atgaaatacaatagatccagcaaagatgt 571
|||| |||||| ||||| |||||||||||
Sbjct: 177 atgagatacaacagatctagcaaagatgt 149
>KJC_c06403
Length = 906
Score = 198 bits (100), Expect = 1e-50
Identities = 422/528 (79%), Gaps = 1/528 (0%)
Strand = Plus / Minus
Query: 30 gctgtaaactggattgaaggaaggggcaaatcagttgtttgtgaggcaattatcaaggaa 89
||||| ||||||||||||||||||||||| ||||| || |||||||| ||||| ||||
Sbjct: 530 gctgtgaactggattgaaggaaggggcaagtcagtagtgtgtgaggccattataaagggt 471
Query: 90 gaggtggtgaaaaatgtattaaaaaccaatgttgcttccctagtggagctcaacatgcta 149
|| |||||||| || || || || || ||||| | | | |||||||| ||||||||
Sbjct: 470 gatgtggtgaagaaagtgttgaagacgaatgtggaggcattggtggagcttaacatgctg 411
Query: 150 aaaaatcttgctggttctgctattgctggtgctctgggtgggtttaatgctcatgcagga 209
|| || || |||||||||| || ||||| ||| | ||||| || || |||||||| |
Sbjct: 410 aagaacctcactggttctgcaatggctggagctttaggtggtttcaacgctcatgctagt 351
Query: 210 aacattgtctctgcaatctttattgcaactggccaggatccagcacagaatattgagagt 269
|||||||| | || |||| || || ||||| || ||||| ||||||||| | ||||||
Sbjct: 350 aacattgtgaccgctatctacatagccactggtcaagatcctgcacagaatgtagagagt 291
Query: 270 tctcactgcattacgatgatggaagctgttaatgatggaaaggatctccatgtctcagtg 329
|| || || ||||| ||||||||||||||||| |||||| ||||||| |||||||| ||
Sbjct: 290 tcacattgtattaccatgatggaagctgttaacgatggacaggatcttcatgtctctgtc 231
Query: 330 tcaatgccttccattgaggtgggtacagttggaggaggaactcaacttgcatctcagtct 389
| |||||||| |||||||| || || || ||||| ||||| || ||| ||||||||||
Sbjct: 230 actatgccttctattgaggttggcacggtgggaggtggaacgcagcttacatctcagtca 171
Query: 390 gcttgtctaaatttgcttggggtgaagggggcaagcaaagagtcaccaggatcaaactca 449
|| || | || | |||||||||||||| || ||||||||| |||||| | || |||
Sbjct: 170 gcgtgcttgaacctacttggggtgaagggtgcgagcaaagagatgccaggagctaattca 111
Query: 450 aggctccttgccaccatagtagctggttcagttttggccggtgagctgtctctgatgtct 509
||||| | ||| ||||||| ||||| || ||| ||||||| ||| ||||||||||||||
Sbjct: 110 aggct-ttagcctccatagttgctggctctgttctggccggagagttgtctctgatgtct 52
Query: 510 gccattgcagctgggcagcttgtcaacagccacatgaaatacaataga 557
|| |||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 51 gctcttgctgctggtcaacttgttaagagccacatgaagtacaataga 4
>KJC_c02058
Length = 895
Score = 155 bits (78), Expect = 1e-37
Identities = 85/86 (98%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 1 gaaattattgttcggacaagaaacctgctgctgtaaactggattgaaggaa-ggggcaaa 59
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 810 gaaattattgttcggacaagaaacctgctgctgtaaactggattgaaggaagggggcaaa 869
Query: 60 tcagttgtttgtgaggcaattatcaa 85
||||||||||||||||||||||||||
Sbjct: 870 tcagttgtttgtgaggcaattatcaa 895