Jatropha Genome Database
- JcCA0317641.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317641.20 + phase: 0 /pseudo/partial
(832 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06878 1225 0.0
KJC_s19978 208 2e-53
>KJC_c06878
Length = 639
Score = 1225 bits (618), Expect = 0.0
Identities = 639/642 (99%), Gaps = 3/642 (0%)
Strand = Plus / Plus
Query: 81 ggctagtaaggaaaatggaggccatttactgcttcatgatcgaaacaaatacaagtcaat 140
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctagtaaggaaa-tggaggccatttactgcttcatgatcgaaacaaatacaagtcaat 59
Query: 141 gtggatccgtgcatactcgaccatttggatgattgggggctttgcttttattgtctacat 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gtggatccgtgcatactcgaccatttggatgattgggggctttgcttttattgtctacat 119
Query: 201 gggtcatctctatatcacagcaatggtggttgtcattcaaatatttatggccaaagaact 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gggtcatctctatatcacagcaatggtggttgtcattcaaatatttatggccaaagaact 179
Query: 261 attcaatttacttaggaaagcccatgaagataggcacctcccaggttttagacttctaaa 320
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 180 attcaatttacttaggaaagcccatgaagataggcac-tcccaggttttagacttctaaa 238
Query: 321 ttggcacttcttcttcactgcaatgctatttgtctatggccgcattctcagtcaaaggct 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ttggcacttcttcttcactgcaatgctatttgtctatggccgcattctcagtcaaaggct 298
Query: 381 agtcaatactgtaacttcagacaaattcttgtatcagctcgtgagcagcctcatcaagta 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 agtcaatactgtaacttcagacaaattcttgtatcagctcgtgagcagcctcatcaagta 358
Query: 441 tcatatggctatttgttatttcttgtatattgcaggttttatgtggttcattctcacgct 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tcatatggctatttgttatttcttgtatattgcaggttttatgtggttcattctcacgct 418
Query: 501 aaagaagaagatgtacaagtatcaatttggccagtatgcatggacgcacatgattcttat 560
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aaaga-gaagatgtacaagtatcaatttggccagtatgcatggacgcacatgattcttat 477
Query: 561 tgtggtgtttactcaatcctctttcactgtggccaatatttttgaaggaattttctggtt 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tgtggtgtttactcaatcctctttcactgtggccaatatttttgaaggaattttctggtt 537
Query: 621 tcttcttccagccacactaattgtcatcaacgacatttttgcttatatcttcggtttctt 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tcttcttccagccacactaattgtcatcaacgacatttttgcttatatcttcggtttctt 597
Query: 681 ctttggaaaaacccctttgatcaagttatcaccaaagaaaac 722
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ctttggaaaaacccctttgatcaagttatcaccaaagaaaac 639
>KJC_s19978
Length = 332
Score = 208 bits (105), Expect = 2e-53
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 515 acaagtatcaatttggccagtatgcatggacgcacatgattcttattgtggtgtttactc 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaagtatcaatttggccagtatgcatggacgcacatgattcttattgtggtgtttactc 60
Query: 575 aatcctctttcactgtggccaatatttttgaaggaattttctggt 619
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatcctctttcactgtggccaatatttttgaaggaattttctggt 105