Jatropha Genome Database
- JcCA0317641.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317641.10 + phase: 0
(2316 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c11483 1065 0.0
>KJC_c11483
Length = 660
Score = 1065 bits (537), Expect = 0.0
Identities = 544/545 (99%), Gaps = 1/545 (0%)
Strand = Plus / Plus
Query: 117 aatgctacacaaagtggatctatctgtttcaccgtatgatactgcatgggttgccatggt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 aatgctacacaaagtggatctatctgtttcaccgtatgatactgcatgggttgccatggt 175
Query: 177 ccctgctggagattccccacgtttcccaggatccttacaatggattttggagaatcaaaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ccctgctggagattccccacgtttcccaggatccttacaatggattttggagaatcaaaa 235
Query: 237 tcctgatggctcatgggcttctcactcaaccgatcccttgctcatcaaagactctctgtc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tcctgatggctcatgggcttctcactcaaccgatcccttgctcatcaaagactctctgtc 295
Query: 297 ttccacattagcatgcatacttgctcttcgaagatgggacgtcggccaaacactcgtttg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ttccacattagcatgcatacttgctcttcgaagatgggacgtcggccaaacactcgtttg 355
Query: 357 caaaggcctagactttatcggctcctatcaatgggccgccacggacaggaatcagcgttc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 caaaggcctagactttatcggctcctatcaatgggccgccacggacaggaatcagcgttc 415
Query: 417 tccaatcggcttcgatatcatatatcctggcatgatcgaccaagcgaggcgtatgggctt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tccaatcggcttcgatatcatatatcctggcatgatcgaccaagcgaggcgtatgggctt 475
Query: 477 gactcttcccattaacccgtcttcgctcgatgcaatgcttaacaagcgagacttggaggt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gactcttcccattaacccgtcttcgctcgatgcaatgcttaacaagcgagacttggaggt 535
Query: 537 -ccagagtgctttgacaagtggtttggagggaaagaagaagtatcttgcatatgttgcgg 595
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cccagagtgctttgacaagtggtttggagggaaagaagaagtatcttgcatatgttgcgg 595
Query: 596 agggtttgcctaaacatgatgactggaataatataatgaagtatcagagaaacaatggat 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 agggtttgcctaaacatgatgactggaataatataatgaagtatcagagaaacaatggat 655
Query: 656 ctttg 660
|||||
Sbjct: 656 ctttg 660
Score = 157 bits (79), Expect = 1e-37
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 37 gggagactaggagtccctcaggaaattatttgcatcccaagacaccctcgaaaagaagag 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggagactaggagtccctcaggaaattatttgcatcccaagacaccctcgaaaagaagag 60
Query: 97 tccaacaattggatttggt 115
|||||||||||||||||||
Sbjct: 61 tccaacaattggatttggt 79