Jatropha Genome Database
- JcCA0317631.40
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317631.40 - phase: 0 /pseudo/partial
(1025 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00289 2000 0.0
KJC_c01255 74 7e-13
>KJC_c00289
Length = 1305
Score = 2000 bits (1009), Expect = 0.0
Identities = 1023/1025 (99%), Gaps = 2/1025 (0%)
Strand = Plus / Plus
Query: 1 gttgaccaagttagatcaacgttaacacatctcttctaagtagccacactatgaagcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 gttgaccaagttagatcaacgttaacacatctcttctaagtagccacactatgaagcaca 90
Query: 61 acagtttcaactgtaagcccaggcccaaacccaaaaagcactccccattcaagcccttct 120
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 91 acagtttcaactgtaagcccaggcccaa-cccaaaaagcactccc-attcaagcccttct 148
Query: 121 ccagtggttttaagcccttctttagctgatttcttccttacttcatccaaaatgaacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ccagtggttttaagcccttctttagctgatttcttccttacttcatccaaaatgaacaaa 208
Query: 181 acacaagcactcgacatgttaccatactcggacaatatatgccttgtcgatgcaagcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 acacaagcactcgacatgttaccatactcggacaatatatgccttgtcgatgcaagcttt 268
Query: 241 tcgggcttaaggcccaacttggcctctacttggtctagaattgcaggcccacctggatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcgggcttaaggcccaacttggcctctacttggtctagaattgcaggcccacctggatgc 328
Query: 301 gcgatccaaaatagagaattccaatctgatatgcccaaaggcttgaaggcctcaactaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gcgatccaaaatagagaattccaatctgatatgcccaaaggcttgaaggcctcaactaaa 388
Query: 361 ctcttctctatattctttgagataagcccaggaacatccttaaggagatgaaatgtaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ctcttctctatattctttgagataagcccaggaacatccttaaggagatgaaatgtaagc 448
Query: 421 cccacttcgcgaagatgtccatctatagccccatcactatctggtaggatagtttgggcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cccacttcgcgaagatgtccatctatagccccatcactatctggtaggatagtttgggcc 508
Query: 481 gcggagactagctcaaacaatggtttctctaattcaggcactgggtctgagcccactatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gcggagactagctcaaacaatggtttctctaattcaggcactgggtctgagcccactatg 568
Query: 541 acagcggcagcaccatcgccgaataaagcttggcccacaaggctatcaagatgggtgtca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 acagcggcagcaccatcgccgaataaagcttggcccacaaggctatcaagatgggtgtca 628
Query: 601 ctaggcccacgaaatgtcaccgccgtaatctcagagcagacgacaagaacacgggcacct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ctaggcccacgaaatgtcaccgccgtaatctcagagcagacgacaagaacacgggcacct 688
Query: 661 ttgttgttttcggcaaggtctttggcaagacggagcaccgtgccacctgcgaaacagcct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ttgttgttttcggcaaggtctttggcaagacggagcaccgtgccacctgcgaaacagcct 748
Query: 721 tgttgatacatcataagcctcttgaccgatgggcgaagacccaagagcttagtgagctga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tgttgatacatcataagcctcttgaccgatgggcgaagacccaagagcttagtgagctga 808
Query: 781 taatcagccccaggcatatctacaccgctggttgtgcaaaagaccaaatgggtaatcttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 taatcagccccaggcatatctacaccgctggttgtgcaaaagaccaaatgggtaatcttc 868
Query: 841 gacttgggctggccccattctttgatggctttaacggctgcttctttgcctagttttggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 gacttgggctggccccattctttgatggctttaacggctgcttctttgcctagttttggt 928
Query: 901 atttccaccaccactatatcttgtctagcatccaatgaaggagccatatattcacaaata 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 atttccaccaccactatatcttgtctagcatccaatgaaggagccatatattcacaaata 988
Query: 961 ttaggattttctttcaagatgtcctcagtcaagtgcatgtaacgcttttttatcatagat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 ttaggattttctttcaagatgtcctcagtcaagtgcatgtaacgcttttttatcatagat 1048
Query: 1021 ttgtc 1025
|||||
Sbjct: 1049 ttgtc 1053
>KJC_c01255
Length = 1217
Score = 73.8 bits (37), Expect = 7e-13
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 73 gtaagcccaggcccaaacccaaaaagcactccccattcaagcccttctccagtggtttta 132
||||| || |||||||||||||| || || ||||||||||||||||| || || ||
Sbjct: 83 gtaagacccggcccaaacccaaatagaacaccccattcaagcccttcgccggtagtagct 142
Query: 133 agcccttctttagctgatttcttccttacttcatccaaaatgaacaaaacacaagcactc 192
|||||||| | |||||||| || | |||||| |||||||| || |||||||||||
Sbjct: 143 ttcccttcttcaatagatttctttctcatttcatctaaaatgaataatacacaagcactg 202
Query: 193 gacatgttaccatactc 209
|||||||||||||||||
Sbjct: 203 gacatgttaccatactc 219
Score = 67.9 bits (34), Expect = 5e-11
Identities = 79/94 (84%)
Strand = Plus / Plus
Query: 841 gacttgggctggccccattctttgatggctttaacggctgcttctttgcctagttttggt 900
||||| ||||| ||||||||||| |||||||| | ||||||||||| ||||| || |||
Sbjct: 851 gacttaggctgaccccattctttaatggctttcgctgctgcttcttttcctagcttaggt 910
Query: 901 atttccaccaccactatatcttgtctagcatcca 934
| |||||| || ||||| ||||| | ||||||||
Sbjct: 911 acttccacaactactatgtcttggcgagcatcca 944