Jatropha Genome Database

JcCA0317631.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0317631.30 + phase: 0 /partial
         (178 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00289                                                            353   9e-98

>KJC_c00289 
          Length = 1305

 Score =  353 bits (178), Expect = 9e-98
 Identities = 178/178 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atggtgaccgtagaggaagttcggaaggcacagcgggcacaaggccccgccaccgtcttg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 atggtgaccgtagaggaagttcggaaggcacagcgggcacaaggccccgccaccgtcttg 1174

                                                                        
Query: 61   gccatcggaactgcaactccttccaactgcgtcgatcaaagcacgtaccctgactactat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 gccatcggaactgcaactccttccaactgcgtcgatcaaagcacgtaccctgactactat 1114

                                                                      
Query: 121  tttcgcatcaccaacagcgagcacaaggtggaacttaaagaaaagttcaagcgcatgt 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 tttcgcatcaccaacagcgagcacaaggtggaacttaaagaaaagttcaagcgcatgt 1056