Jatropha Genome Database

JcCA0317481.40
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0317481.40 - phase: 2 /partial
         (454 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10739                                                            153   4e-37

>KJC_c10739 
          Length = 545

 Score =  153 bits (77), Expect = 4e-37
 Identities = 91/93 (97%), Gaps = 2/93 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcattcaatgacaaaccagtaaatgaagctgcagttggcccaatagggaaggaactttt 60
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 455 ctcattcaatgacaaaccagtaaatgaagctgcagttggcccaata-ggaaggaac-ttt 512

                                            
Query: 61  tgagaaagaacaggaagaccttctgtctgatct 93
           |||||||||||||||||||||||||||||||||
Sbjct: 513 tgagaaagaacaggaagaccttctgtctgatct 545