Jatropha Genome Database
- JcCA0317291.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317291.30 + phase: 0 /partial
(1137 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08531 1098 0.0
KJC_c07979 666 0.0
>KJC_c08531
Length = 1001
Score = 1098 bits (554), Expect = 0.0
Identities = 554/554 (100%)
Strand = Plus / Minus
Query: 507 gaagaacatcgagaggctttctgttctgacccattgtaatactggcagtcttgctacagc 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 gaagaacatcgagaggctttctgttctgacccattgtaatactggcagtcttgctacagc 942
Query: 567 tggatatggtactgccctgggagtgatccgttcacttcatactgatggagtattggagag 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 tggatatggtactgccctgggagtgatccgttcacttcatactgatggagtattggagag 882
Query: 627 ggcctattgcacagaaactcgtcctttcaatcaaggagctagactcacagcttttgagtt 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 ggcctattgcacagaaactcgtcctttcaatcaaggagctagactcacagcttttgagtt 822
Query: 687 ggtgcatgacaaaatacctgctactcttatagcagattctgctgcagctgcattgatgaa 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 ggtgcatgacaaaatacctgctactcttatagcagattctgctgcagctgcattgatgaa 762
Query: 747 agatggtcgagtgagtgctgtaattgttggagcagaccgtgtggctgcaaatggagatac 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 agatggtcgagtgagtgctgtaattgttggagcagaccgtgtggctgcaaatggagatac 702
Query: 807 tgctaacaagattgggacctacagccttgccttatgtgctatgcatcacaacattccatt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tgctaacaagattgggacctacagccttgccttatgtgctatgcatcacaacattccatt 642
Query: 867 ttatgttgctgccccattgacctccatcgatttatgcctttcttctggaaaccaaattgt 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ttatgttgctgccccattgacctccatcgatttatgcctttcttctggaaaccaaattgt 582
Query: 927 catagaggaaagatcacccaaagagttattaaatacacgtggaggtcttggagagcaagt 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 catagaggaaagatcacccaaagagttattaaatacacgtggaggtcttggagagcaagt 522
Query: 987 tgctgcatctgggatctctatctggaacccagcttttgatgttacccctgcgaatttgat 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tgctgcatctgggatctctatctggaacccagcttttgatgttacccctgcgaatttgat 462
Query: 1047 aagtgggatcataa 1060
||||||||||||||
Sbjct: 461 aagtgggatcataa 448
>KJC_c07979
Length = 565
Score = 666 bits (336), Expect = 0.0
Identities = 336/336 (100%)
Strand = Plus / Plus
Query: 1 atggcaaccaattctaattccagtgttgggcttgaagttagtaacactcttcagtctatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atggcaaccaattctaattccagtgttgggcttgaagttagtaacactcttcagtctatc 289
Query: 61 tgctacaaacgcggctcgcttcatctcctcgaccagagaaagcttcctctcgagacggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tgctacaaacgcggctcgcttcatctcctcgaccagagaaagcttcctctcgagacggaa 349
Query: 121 tatctggttatcggagatgcatcagatggatggtctgctataagagagatggtggtccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tatctggttatcggagatgcatcagatggatggtctgctataagagagatggtggtccgt 409
Query: 181 ggggcacctgctattgctattgcagcagctctctcactcgcagttgaagtttttaacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ggggcacctgctattgctattgcagcagctctctcactcgcagttgaagtttttaacttg 469
Query: 241 caggattttaatggtacatctgatgatgctggctcgttcctcttccagaaattggactat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 caggattttaatggtacatctgatgatgctggctcgttcctcttccagaaattggactat 529
Query: 301 ctcgtttcaagccggccaactgcagtgaatctttca 336
||||||||||||||||||||||||||||||||||||
Sbjct: 530 ctcgtttcaagccggccaactgcagtgaatctttca 565