Jatropha Genome Database
- JcCA0317211.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317211.30 - phase: 0
(921 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02942 1746 0.0
KJC_c10496 355 1e-97
KJC_c07682 206 7e-53
KJC_c00154 64 6e-10
KJC_c00738 58 4e-08
KJC_c04522 56 2e-07
>KJC_c02942
Length = 1100
Score = 1746 bits (881), Expect = 0.0
Identities = 909/918 (99%), Gaps = 2/918 (0%)
Strand = Plus / Plus
Query: 1 atgccgtcgcacggggatctggaccgtcagatcgagcacctgatggagtgtaagcccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atgccgtcgcacggggatctggaccgtcagatcgagcacctgatggagtgtaagcccttg 219
Query: 61 ccggaggcggaggtgaagacgctctgcgatcaagccagagcgattcttgttgaggaatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ccggaggcggaggtgaagacgctctgcgatcaagccagagcgattcttgttgaggaatgg 279
Query: 121 aacgttcagccggtgaaatgtccggtcacggtttgcggcgatattcatggccagttctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aacgttcagccggtgaaatgtccggtcacggtttgcggcgatattcatggccagttctac 339
Query: 181 gatctcatcgagctctttaggataggagggaatgcgcctgatactaattatctctttatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gatctcatcgagctctttaggataggagggaatgcgcctgatactaattatctctttatg 399
Query: 241 ggagactatgtagatcgtgggtactattcagtggaaaccgtcacactcttagtggccctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggagactatgtagatcgtgggtactattcagtggaaaccgtcacactcttagtggccctg 459
Query: 301 aaagttcgttatagagatagaatcacaattcttagaggaaaccatgagagcaggcagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aaagttcgttatagagatagaatcacaattcttagaggaaaccatgagagcaggcagatt 519
Query: 361 actcaagtgtatggtttctatgatgagtgcttgagaaaatatggaaatgccaacgtgtgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 actcaagtgtatggtttctatgatgagtgcttgagaaaatatggaaatgccaacgtgtgg 579
Query: 421 aagtatttcactgacctttttgattacctaccccttacggccctcattgagagtcaggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aagtatttcactgacctttttgattacctaccccttacggccctcattgagagtcaggtt 639
Query: 481 ttctgtttgcacggtggactttcaccatctttggatacgttagataatatccgagctttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ttctgtttgcacggtggactttcaccatctttggatacgttagataatatccgagctttg 699
Query: 541 gaccgtatacaagaggttccacatgaaggacccatgtgtgatctattgtggtctgatcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gaccgtatacaagaggttccacatgaaggacccatgtgtgatctattgtggtctgatcca 759
Query: 601 gacgatcgatgtgggtggggcatatctcctcgtggtgctggctatac-atttggacagga 659
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 760 gacgatcgatgtgggtggggcatatctcctcgtggtgctggctatactatttggacagga 819
Query: 660 tatagctgctcaattcaaccataccaatggactcactctgatttcacgagctcaccagct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 tatagctgctcaattcaaccataccaatggactcactctgatttcacgagctcaccagct 879
Query: 720 tgtgatggaaggatacaattggtgccaggnnnnnnntgtggtaactgtatttagtgctcc 779
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 880 tgtgatggaaggatacaattggtgccaggaaaaaaatgtggtaactgtatttagtgctcc 939
Query: 780 aaattattgctaccggtgtgggaatatggctgcaattctagagattggagagaacatgga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 aaattattgctaccggtgtgggaatatggctgcaattctagagattggagagaacatgga 999
Query: 840 ccag-aatttccttcaatttgatcctgcacctcggcaaattgaaccggacaccacacgca 898
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 ccagaaatttccttcaatttgatcctgcacctcggcaaattgaaccggacaccacacgca 1059
Query: 899 agacgcctgattattttt 916
||||||||||||||||||
Sbjct: 1060 agacgcctgattattttt 1077
>KJC_c10496
Length = 488
Score = 355 bits (179), Expect = 1e-97
Identities = 403/475 (84%), Gaps = 2/475 (0%)
Strand = Plus / Plus
Query: 265 tattcagtggaaaccgtcacactcttagtggccctgaaagttcgttatagagatagaatc 324
||||| |||||||| || || || |||||||| || |||||||| ||||| || || ||
Sbjct: 16 tattctgtggaaactgtgactcttttagtggcactaaaagttcgatatagggacaggatt 75
Query: 325 acaattcttagaggaaaccatgagagcaggcagattactcaagtgtatggtttctatgat 384
||||||||||||||||| |||||||| | || || |||||||||||||| || ||||||
Sbjct: 76 acaattcttagaggaaatcatgagagtcgtcaaataactcaagtgtatggcttttatgat 135
Query: 385 gagtgcttgagaaaatatggaaatgccaacgtgtggaagtatttcactgacctttttgat 444
|| ||||| ||||| ||||||||||||||||| ||||| ||||||||||| || |||||
Sbjct: 136 gaatgcttaagaaa-tatggaaatgccaacgtctggaaatatttcactgatctctttgac 194
Query: 445 tacctaccccttacggccctcattgagagtcaggttttctgtttgcacggtggactttca 504
|| ||||| || || ||||| |||||||||||||| ||||| || ||||||||||| ||
Sbjct: 195 tatctaccactgacagccctaattgagagtcaggtcttctgcttacacggtggactctct 254
Query: 505 ccatctttggatacgttagataatatccgagctttggaccgtatacaagaggttccacat 564
|||||||| ||||| ||||||||||||||| | ||||| |||| ||| |||||||| |||
Sbjct: 255 ccatctttagatacattagataatatccgatcgttggatcgtagacaggaggttcctcat 314
Query: 565 gaaggacccatgtgtgatctattgtggtctgatccagacgatcgatgtgggtggggcata 624
||||| || ||||||||||| | |||||||||||||| || |||||||||||||| ||
Sbjct: 315 gaaggtccaatgtgtgatctcctatggtctgatccagatgaccgatgtgggtggggaat- 373
Query: 625 tctcctcgtggtgctggctatacatttggacaggatatagctgctcaattcaaccatacc 684
||||||||||| ||||| || || |||||||| ||||| || || |||||||| |||
Sbjct: 374 tctcctcgtggagctggatacacttttggacaagatatctctcaacagttcaaccacacc 433
Query: 685 aatggactcactctgatttcacgagctcaccagcttgtgatggaaggatacaatt 739
||||| |||||||| ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 434 aatgggctcactctcatttctagagctcaccagcttgttatggaaggatacaatt 488
>KJC_c07682
Length = 552
Score = 206 bits (104), Expect = 7e-53
Identities = 111/112 (99%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 369 gtatggtttctatgatgagtgcttgagaaaatatggaaatgccaacgtgtggaagtattt 428
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 302 gtatggtttctatgatgagtgcttgagaaa-tatggaaatgccaacgtgtggaagtattt 360
Query: 429 cactgacctttttgattacctaccccttacggccctcattgagagtcaggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cactgacctttttgattacctaccccttacggccctcattgagagtcaggtt 412
Score = 115 bits (58), Expect = 2e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 476 aggttttctgtttgcacggtggactttcaccatctttggatacgttagataatatccg 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aggttttctgtttgcacggtggactttcaccatctttggatacgttagataatatccg 552
>KJC_c00154
Length = 1339
Score = 63.9 bits (32), Expect = 6e-10
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 550 caagaggttccacatgaaggacccatgtgtgatctattgtggtctgatccagacgatcga 609
||||| ||||| ||||| || ||||||||||| || |||||||||||||| || |||||
Sbjct: 701 caagaagttccccatgagggtcccatgtgtgaccttttgtggtctgatcctgatgatcgt 760
Query: 610 tgtgggtggggcatatctcctcgtggtgctggctatacatttgg 653
||||| ||||| || || || | |||||||| ||||| |||||
Sbjct: 761 tgtggttggggtatctcaccgaggggtgctggatatacctttgg 804
>KJC_c00738
Length = 1219
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 337 ggaaaccatgagagcaggcagattactcaagtgtatggtttctatgatgagtgcttgaga 396
||||| |||||||| ||||| | ||||| || ||||||||||||||||||||| ||
Sbjct: 832 ggaaatcatgagagtaggcaactaactcaggtatatggtttctatgatgagtgccaaagg 773
Query: 397 aaatatggaaatgccaa 413
|| ||||||||||||||
Sbjct: 772 aagtatggaaatgccaa 756
>KJC_c04522
Length = 742
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 335 gaggaaaccatgagagcaggcagattactcaagtgtatggtttctatgatgagtgc 390
|||| |||||||||||| | ||||| ||||| || ||||| |||||||||||||||
Sbjct: 171 gagggaaccatgagagccgtcagataactcaggtttatggattctatgatgagtgc 226